Nyctereutes procyonoides (raccoon dog): 129517807
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Entry
129517807 CDS
T09008
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04622
RIG-I-like receptor signaling pathway
npo05161
Hepatitis B
npo05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129517807 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
129517807 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
129517807 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129517807 (DDX3X)
03041 Spliceosome [BR:
npo03041
]
129517807 (DDX3X)
03036 Chromosome and associated proteins [BR:
npo03036
]
129517807 (DDX3X)
Enzymes [BR:
npo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129517807 (DDX3X)
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129517807 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
129517807 (DDX3X)
Spliceosome [BR:
npo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129517807 (DDX3X)
Chromosome and associated proteins [BR:
npo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129517807 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129517807
NCBI-ProteinID:
XP_055193909
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRGGFGKFE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSSFSSSRAGSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttcagataatcagagtggaggaagtacagcaagcaaggggcgctatattcct
cctcatttaaggaatagagaagctactaaaggattctacgataaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttggatctcgtagtgattcaagaggg
aaatctagtttctttagtgatcgtggcagtggatcaagaggaaggtttgatgatcgtggc
cggagtgactatgacggcattggcagccgtggtgatagaggtggctttggcaaatttgaa
cgtggtggaaatagtcgctggtgtgacaaatcagacgaagatgactggtcaaaaccgctc
ccaccaagtgaacgcttggaacaggaactcttttcgggaggaaacactgggattaacttt
gagaaatatgacgacattccagttgaggcaacaggcaacaattgtcctccacatattgaa
agtttcagtgatgttgaaatgggagaaattattatgggaaatattgagcttactcgttat
actcgcccaactccagtgcaaaagcatgctattcctattatcaaagagaaaagagacttg
atggcttgtgcccaaacggggtctggaaaaactgcagcgtttctcttgcccatcctaagt
cagatttattcagatggtccaggcgaggctttgagagccatgaaggaaaatggaaggtat
gggcgtcgcaagcaataccctatctccttggtattagcaccaactagagaattggcagta
cagatctatgaggaagccaggaaattttcataccgatctagagttcgaccttgcgtggtt
tatggtggtgctgatataggtcagcagattcgagacttagaacgtggatgccacttgtta
gtagctactccaggacgactagtggatatgatggaaagaggaaagattggattagatttc
tgcaaatacttggtgttagatgaagctgatcggatgttggatatgggttttgaacctcag
atacgtagaatagttgaacaagatactatgcctccaaagggtgtccgccacactatgatg
tttagtgctacattccctaaggaaatacagatgctggctcgtgatttcttagatgaatat
atctttttagctgtaggaagagttggctctacctctgagaacataacacagaaagtagtt
tgggtggaagagtctgacaaacggtcatttttgcttgaccttctaaatgcaacaggcaag
gattcactgacattagtgtttgtggagaccaaaaaaggtgcagattctctggaggatttc
ttgtaccatgaaggatatgcttgtaccagtattcatggagatcgatctcagagagacaga
gaagaggcccttcaccagttccgctcaggaaaaagcccaattttagtggctacagcagta
gcagcaagaggactggacatttcaaatgtgaaacatgttatcaactttgacttgccaagt
gatattgaagaatatgtacatcgcattggccgtacaggacgtgtaggaaaccttggcctt
gccacctcattctttaacgagaggaatataaatattaccaaggatttgttggatcttctt
gttgaagctaaacaagaagtgccatcttggttagaaaacatggcttatgaacaccactac
aagggtagcagtcgtggacgatctaagagtagtaggtttagtggaggatttggtgcccga
gactatcgacaaagcagtggtgccagcagttccagcttcagcagtagccgtgcaggcagc
agccgcagcggtggaggtggccacggcagcagcagagggtttggtggaggtggctatgga
ggcttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtgg
ggtaactga
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