Nyctereutes procyonoides (raccoon dog): 129518404
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Entry
129518404 CDS
T09008
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04613
Neutrophil extracellular trap formation
npo05014
Amyotrophic lateral sclerosis
npo05034
Alcoholism
npo05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
129518404 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
129518404 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129518404 (HDAC6)
09165 Substance dependence
05034 Alcoholism
129518404 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npo01009
]
129518404 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129518404 (HDAC6)
04131 Membrane trafficking [BR:
npo04131
]
129518404 (HDAC6)
03036 Chromosome and associated proteins [BR:
npo03036
]
129518404 (HDAC6)
Enzymes [BR:
npo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129518404 (HDAC6)
Protein phosphatases and associated proteins [BR:
npo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129518404 (HDAC6)
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129518404 (HDAC6)
Membrane trafficking [BR:
npo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129518404 (HDAC6)
Chromosome and associated proteins [BR:
npo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129518404 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
129518404
NCBI-ProteinID:
XP_055194509
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MEKRASSTRRPAGRQEFGGGSPGRSLKKGLRSSRVRGEVSPTMTSTGQDSTTTRQRRSRH
NPHSPPHDSSVTSKRGVKKGALRHSSPSLAEVKKKGRMKKLSQAAEQDLIVGLQGLDLNL
EAKTLCGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQDGLLDRCVYFQARFAEK
EELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPVWIRTNSYTCACLASGSVLR
LVDAVLRNEIRNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDWD
VHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQVG
MRDADYIAAFLRLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGL
AGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPILESPSAPCPSAQASLFCTLEALEP
FWEVLVRSAETLEEDILEEEKAEKEEERPWQPSVLPVLTWPMLQARTGLVYDQRMMGHYN
LWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHSAEYVGRLRATEKM
KTRELHREGSNFDSIYICPSTFACAQLATGSVCRLVEAVLAREVLNGAAVVRPPGHHAER
DAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRY
DHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGPRVGDADYLAAWHRLVLPIAYEFNPEL
VLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRVVLILEGGYNLTSISESMAAC
TRSLLGDPPPLLTLSRPPLSGALASITETIQIHRRYWRSLRVMKVEDKEGPSTSELITKK
VTQPANPGSAERMTTPEGNTLDIDTEKGPSASSVEESTPGQAKSETAVVELNQDQSLEAT
TGETTLDQTIPEAATEGTTPGQTTSEEAVGGAEVIQTSCTDNQTPPTSPVQGATPPISPS
KLIENLRTLELNSEAEKAPESQIPEEEGLLGEAAGGQDVDDSVLNESCGDHADTDQVVLY
AVTPLSWCPHLVAVCPIPESGLDVTQPCQDCGVLQENWVCLSCYQVYCGRYISAHMLHHH
EDSGHPLVLSYVDLSTWCYNCEAYVHHQALLDVKNVAHQNKFGEDMPHSH
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagagggcctcaagcacccgccgtcccgcaggtcgccaggaatttggcggcggg
agccctgggcggagtttgaaaaaagggctgcgctcaagccgcgtcaggggtgaagtctcc
ccgaccatgacctccaccggccaggattccaccacaaccaggcagcgaaggagtaggcat
aacccccattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggt
gccttacgccactccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaag
ctcagccaagcagcagagcaagacctaatcgtgggcctgcaagggctggatctgaacctt
gaggccaagacactttgtggcactggcttggtgtttgatgagcaactaaatgaattccac
tgcctctgggatgacagctttcctgagggccctgagcggctccatgccatcaaggaacaa
ctgatccaggatggcctcctggaccgctgtgtgtacttccaggctcggtttgctgaaaag
gaggagctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtac
atgaatgagggagagctccgcatcctagctgacacctatgactcagtttatctgcatccg
gtatggataagaactaactcctatacttgcgcctgcctggcctcaggctctgtccttagg
ctggtggatgcagtcctgaggaacgagatccggaatggcatggccattgtcaggcctcct
ggacaccacgcccagcacagccttatggatgggtattgcatgttcaaccatgtggccgtg
gctgcccgctacgctcaacagaagcataacattgagagggtccttatcgtggattgggat
gtacaccatggtcaaggaacacagtttacctttgaccaggaccccagcgtcctctatttc
tccatccaccgctatgagcagggtcggttctggccccacctgaaggcctctaactggtcc
accataggttttggccaaggccagggatataccatcaatgtgccttggaaccaggtgggg
atgcgagatgctgactacattgctgctttcctgcgcctccttctgccagtcgcccttgag
ttccagccccagctggtcctggtggccgctggatttgatgccctccaaggggaccccaag
ggtgagatggccgccactccggcagggttcgctcagctaacccacctgctcatgggtctg
gcaggaggcaagctgatcctatctctggagggcggctacaacctccgcgccctggctgag
ggtgtcagcgcctcactccacacccttctgggagacccctgccccatcctggagtctccc
agtgccccctgcccaagtgcccaggcgtcactcttctgcaccctggaagccctggagccc
ttctgggaggtccttgtgagatcagctgagaccctggaggaggacatcctggaggaggaa
aaggcggagaaggaagaggagagaccgtggcagccctcagtgctcccagttctgacgtgg
cccatgctgcaggctcgcacagggctggtctatgaccagcggatgatgggtcactacaac
ttgtgggacaaccatcacccagagatgcctcagcgagtctttcggatcatgcgccgtttg
gaagagctgggccttgcggggcgctgccttaccttgcccacacgtcctgccacggacgct
gagctgcttacctgccacagtgccgagtatgtgggccgtctgcgggcaaccgagaagatg
aaaacccgggagctgcaccgcgagggctccaactttgactctatctacatctgccccagc
acctttgcctgtgcgcagctggccactggctctgtgtgccgcctggtggaggctgtacta
gccagagaggttttgaatggtgctgctgtggtgcgtcccccaggacaccacgcagagcgg
gatgccgcttgtggtttctgctttttcaactctgtggctgtggctgctcgccatgcccag
gccatcagtgggcatgcgctgcggatcctgatagtggactgggatgtccatcatggtaat
ggaactcagcacatatttgaggaagaccccagtgtgctctacatttccctgcatcggtat
gatcacggcaccttctttcccatgggggatgagggtgccagcagccaggtaggccaggcc
gcaggcactggcttcactgtcaacgtggcctggaatgggccccgcgtgggtgacgccgac
tacctggctgcctggcatcgtctggtgcttcctattgcctacgagtttaacccggaactg
gtgctggtctcagctggctttgacgctgcacggggggacccgctggggggctgccaggtg
tcaccagagggctatgcccacctcacccacctgctgatgggcctcgccaatggccgtgtt
gtcctaatcctggagggtggctataacctgacatccatctcagagtccatggctgcctgc
acccgttccctccttggggacccaccaccactgctaaccctgtcgcggcccccactatcg
ggggccctggcctccatcaccgagaccatccaaatccatcgcagatactggcgcagcttg
cgagtcatgaaggtcgaagacaaggagggaccctctacttctgagttgatcaccaagaaa
gtgacccaaccagccaaccctgggtcagctgagaggatgaccacaccagaagggaacact
ctggacatagacacagagaagggtccctcagcatcatccgtggaagagtccactcctggg
caagctaagtcagagactgctgtggtggagctcaatcaggaccagtccttggaggctacc
acaggggaaaccactctggaccagaccatcccagaggcagccacagaaggaaccacacca
ggccagaccacctcagaggaagctgtggggggagctgaagtgatccaaacctcatgtact
gataaccagactcccccaacctcacctgtgcaaggagccacacccccgatatcccccagt
aaactgattgagaatctcaggaccttggaactaaacagcgaggctgagaaggcaccagaa
tctcagatcccagaagaggaggggctactaggagaggcagctggaggtcaggacgtggat
gattctgtgctgaatgagagctgtggggaccatgctgacactgaccaggtcgtgctttat
gctgtgacaccactgtcctggtgtccccatttggtggcagtgtgccccatccctgagtca
ggcctcgacgtgacccaaccttgtcaggactgtggagtgctccaggagaactgggtgtgt
ctctcttgctatcaggtctactgcggtcgttacatcagtgctcatatgctccaccaccac
gaagactcaggacacccgctggtcctcagctacgtcgacctatccacctggtgttacaac
tgtgaggcctatgtccaccaccaggctctcctagatgtgaagaacgttgctcaccagaac
aagtttggggaggacatgccccactcacactaa
DBGET
integrated database retrieval system
