Nyctereutes procyonoides (raccoon dog): 129518414
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Entry
129518414 CDS
T09008
Name
(RefSeq) LOW QUALITY PROTEIN: histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03082
ATP-dependent chromatin remodeling
npo03083
Polycomb repressive complex
npo04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129518414
03083 Polycomb repressive complex
129518414
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
129518414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npo03036
]
129518414
Chromosome and associated proteins [BR:
npo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
129518414
Histone modification proteins
HAT complexes
HATB complex
129518414
HDAC complexes
Sin3A-HDAC complex
129518414
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
129518414
PRC2.2
129518414
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
129518414
Heterochromatin formation proteins
Other heterochromatin formation proteins
129518414
Chromatin remodeling factors
NuRD complex
129518414
NuRF complex
129518414
NuRF complex (fruit fly)
129518414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
WD_LRWD1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
eIF2A
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
MIOS_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
129518414
NCBI-ProteinID:
XP_055194525
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADKEAAFDDAVEECVISKEYKIWKKNTPFLYDLVMTHALKWPSLTAQWLPDVTRPEGKD
FSIHXLVLGTHPSDEQNHPVIASVQLPNDDAQFDASHYNSEKGEFGGFGSVSGKIEIEIK
INHEGKVNRARYMPQNPCIISTKTPSSDVLIFDYTKHPSKPDPSGKCNPDLCLHGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDARTIFIGHTAMVEDVLWHLLHE
SLFGTVADDQKLMIWDTHSNNTSKPSHSVDAHTAEVNCLCFNPYSEFILAAGSANKTIAL
WDLRNLKLKLHSFQSYKDEIFQVQWSPHNETILASSGTDHRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPEGSVNP
EGQRS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaggaagcagcctttgatgatgcagtagaagaatgtgtgatcagcaaagag
tacaaaatatggaaaaagaacaccccttttctttatgatttggtgatgacccatgctctg
aagtggcctagcctaactgcacagtggcttccagatgtaaccagaccagaagggaaagac
ttcagcattcattgacttgtcctgggaacacacccgtcagatgaacaaaaccatcctgtg
atagccagtgtgcagctccctaatgatgatgctcagtttgatgcttcacactacaacagt
gagaaaggagaatttggaggttttggctcagttagtggaaaaattgaaatagaaataaaa
atcaaccatgaaggaaaagtgaaccgggcacggtatatgccccagaacccttgcatcatt
tcaacaaagactccatccagtgatgttcttatttttgactatacaaaacatccttccaaa
ccagacccttctggaaagtgcaacccagacttgtgtcttcatggacatcaaaaggaaggc
tatggactttcttggaacccaaatctcagtgggcacttacttagtgcttcagatgaccac
accatttgcctttgggacatcagtgctgttccgaaggaaggaaaagttgtggatgcaagg
accatctttatagggcatactgcaatggtagaagatgttttgtggcatctgcttcatgag
tctctgtttgggacagttgctgatgatcagaaacttatgatctgggatactcattcaaac
aatacttccaaaccaagccactcagttgatgctcacactgctgaagtgaactgcctatgt
ttcaatccttatagtgagttcattcttgccgcaggatcagccaacaagactattgccttg
tgggatctgagaaatctgaaacttaagttgcattcctttcaatcatataaggatgaaata
ttccaggtccagtggtcacctcacaatgagactattttggcttccagtggtactgatcac
agactgaatgtctgggatttaagtaaaattggagaggaacaatccccagaagatgcagaa
gatgggccaccagaattgttgtttattcatggtggtcacactgccaagatatctgatttc
tcttggaatcccaatgaaccttgggtaatttgttctgtatcagaagataatatcatgcaa
gtttggcaaatggcagagaacatttataatgatgaagaacctgaaggaagtgtgaatcca
gaaggacaaaggtcctag
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