Nyctereutes procyonoides (raccoon dog): 129519188
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Entry
129519188 CDS
T09008
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03020
RNA polymerase
npo03420
Nucleotide excision repair
npo05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129519188 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
129519188 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
129519188 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npo03021
]
129519188 (POLR2B)
03400 DNA repair and recombination proteins [BR:
npo03400
]
129519188 (POLR2B)
Enzymes [BR:
npo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129519188 (POLR2B)
Transcription machinery [BR:
npo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129519188 (POLR2B)
DNA repair and recombination proteins [BR:
npo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129519188 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
129519188
NCBI-ProteinID:
XP_055195433
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaagatgatgatgaaatcaccccagac
ttgtggcaagaagcatgctggattgtaatcagttcctattttgacgagaaaggcttggtc
agacaacagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgctccacctatagacctacaagctgaagctcagcatgctagtggagaagttgaagaa
ccgccaagatacttgctgaagtttgaacaaatttacctctccaagcctacccattgggaa
agagatggtgctccttcgccaatgatgccaaatgaggccagattaagaaatctcacgtat
tctgctccactttatgttgatataacaaaaacagtcattaaagaaggtgaagaacaactt
caaactcagcatcagaaaacttttataggaaaaattccaattatgttgcgttcaacttac
tgcctgttgaatggcttaacagatcgtgatctttgtgagttaaatgaatgtcctttggat
cctggtggatatttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gcgacaaacactgtctatgtgttcgccaaaaaggattctaaatatgcctacacgggagag
tgtagatcatgtctggagaattcttcccgacccacaagtactatttgggttagcatgctg
gcaagaggaggacagggtgcaaaaaagagtgctattggtcaacgcattgtggcaactcta
ccatatatcaagcaggaagttcccatcattattgtgtttagagcattaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gtgaaaccttctctcgatgaagcttttgtcatccaggagcagaatgttgcactaaatttc
attggctcaagaggggcaaagcctggggtcactaaagagaaaagaattaaatatgcaaaa
gaagtcttacaaaaagaaatgctccctcatgttggtgtcagtgacttttgtgagaccaag
aaagcttattttttggggtacatggttcataggttgcttctagcagccttgggtagaaga
gaattagatgacagggatcactatggaaacaaaagattggatcttgctgggccactgctt
gcattcttatttagaggtatgtttaagaatttgcttaaagaagtgcggatctatgcacag
aagtttattgatcgaggaaaggattttaacttggagttggcaattaaaacaaggattata
tctgatggcctaaaatattccttagctactggaaactggggtgaccaaaagaaagctcat
caagccagagctggagtatctcaggtattaaaccgcctgacttttgcctctactctttct
caccttcgtcgtttgaattcacctattggtagagatggcaagctagcaaaaccaagacag
ttgcataatacattgtggggaatggtatgtcctgctgagaccccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcagttgggtctcagccttctcca
attctggaatttttagaagaatggagtatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggttgctgggttggaatacataaagatcct
gaacaacttatgaacactctaaggaaattgcggcgtcagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagagggagattcggatttatacagatgcaggccgt
atttgtaggccacttctgattgtagaaaaacaaaaactacttttgaagaagagacacatt
gatcaattgaaagagagagaatataacaactacagttggcaggatcttgtggccagtggg
gtagtagaatatattgatactctggaagaagaaaccgtaatgcttgcaatgactccagat
gatttacaggaaaaagaagtagcttattgttccacatatacacactgtgagattcatcca
tcaatgattcttggtgtctgtgcatctattattccctttcctgatcataaccagtcccct
agaaacacatatcagtctgctatgggtaagcaggctatgggagtttatatcaccaacttc
catgttcgtatggatacactggcccatgttctgtattatcctcaaaaaccgcttgtgact
acacggtcaatggaatatctacgatttagagagcttccagcaggtatcaactccattgtg
gccattgcatcatacactggatataaccaagaagactctgttatcatgaatcgttcagct
gtagacagaggctttttcaggtctgtcttctatcgatcatataaagaacaggaatctaag
aaaggatttgatcaagaagaagtttttgagaagccaactcgcgaaacatgccagggtatg
aggcatgccatttatgacaagctggacgatgatggtttgatagctcctggagtccgtgta
tcaggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaatta
gagggcactaatagacgctataccaagagagactgtagcacgtttcttagaactagtgag
actggcattgtggatcaggttatggtaactctcaaccaggaaggatataaattttgtaaa
ataagggtccgctctgttagaattccacagatcggagacaaatttgctagtcgacatggt
caaaagggtacttgtggtattcagtacagacaagaggacatgccttttacctgtgagggt
atcacccctgatatcatcataaatccccatgccattccctctcgcatgactattggtcac
ttgattgaatgtcttcaagggaaggtatcagctaacaagggtgaaattggtgatgccact
ccatttaatgatgctgttaacgtgcagaagatttctaatctgttatctgattatggctac
catctcagaggaaatgaggtcctgtacaatggtttcactggtcgaaaaatcacgtcacag
atttttattggtcccacatattaccagcgtttgaagcatatggtggatgataagattcat
tctcgtgccaggggacctattcagatccttaatagacagcccatggagggtagatctcgt
gatggtggtctacgttttggagaaatggaacgagattgtcagattgcccatggagcagcc
cagtttttaagggaaagattgtttgaggcatcagatccatatcaggttcatgtttgcaat
ctttgtggtataatggcgattgctaacacgaggacccatacatatgaatgccgaggctgc
cgcaataaaacccagatttctttggtgcgaatgccttatgcgtgcaagctgttgtttcag
gaacttatgtctatgagtattgcacctcgaatgatgagtgtttag
DBGET
integrated database retrieval system
