KEGG   Nyctereutes procyonoides (raccoon dog): 129519349
Entry
129519349         CDS       T09008                                 
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
npo  Nyctereutes procyonoides (raccoon dog)
Pathway
npo03020  RNA polymerase
npo03420  Nucleotide excision repair
npo05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:npo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129519349 (POLR2J)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129519349 (POLR2J)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    129519349 (POLR2J)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:npo03021]
    129519349 (POLR2J)
   03400 DNA repair and recombination proteins [BR:npo03400]
    129519349 (POLR2J)
Transcription machinery [BR:npo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     129519349 (POLR2J)
DNA repair and recombination proteins [BR:npo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129519349 (POLR2J)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 129519349
NCBI-ProteinID: XP_055195751
LinkDB
Position
Unknown
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgcccctcccgcctttgagtcgttcttgctcttcgagggcgaaaagaagattacc
attaacaaggacaccaaggtacccaatgcctgtttgtttaccatcaacaaagaagaccac
acactaggaaacatcatcaaatcacagctgctgaaggacccccaggtgctgtttgctggc
tacaaagtcccccaccccctggagcacaagatcatcattcgagtgcagaccacaccggac
tacagcccccaggaggccttcaccaacgccatcacagacctcatcagcgagctgtccctg
ctggaagagcgattccgggtggctattaaagacaagcaagaaggcatcgaatag

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