Nyctereutes procyonoides (raccoon dog): 129519970
Help
Entry
129519970 CDS
T09008
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03440
Homologous recombination
npo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129519970 (PALB2)
03460 Fanconi anemia pathway
129519970 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npo03400
]
129519970 (PALB2)
DNA repair and recombination proteins [BR:
npo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
129519970 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
129519970 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
129519970
NCBI-ProteinID:
XP_055196794
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKFKNSIKKTAEEHDCLLQ
QDTSPQLNHSESKNKVSPCDTLQISTHLDEETGEKTPITFDIEPESFNPEHGSVEELHIQ
RTGDIQEHFPYWVGGPGVEKRQSKLPGRRKKQQKRTFTSQARDSLFDTDSLILSGKRLKE
QEENNGENPRTPVTKRTYLSSSMSDIPGSPSPVTETNVRGVLIPPTAKPQRDVDALIRGN
NFPMVPTLASFTLSNSSSSHHLEHKPPKDDWELITHSLKNINPASPVNLEAQVKKITVSK
DNPGISASGQLPQSPDLEPDNSCSPNKLISDNLLADENQNLKGQNHTEESLKFPHNTLDG
RNESLQENEVLSQSKSLSPEVISPASTENQTYSCTVLEGLLFPAEYYVRTTRRMSNCQRK
VALEAVIQSHLGVRKKVFKNKSKDATKNLNLCSEETDQSEIRTSDTCTKQSSSRRSQKHL
SLTEVHSPTGPTEDNLPRKAVTEPSGGRHGRKRKSICPPVLDHHELLLPTPSTSGVNRSK
EEITLHKDQNEKVIIRGKKDHCQKEDSLSSRKNGYLALDSVFKASFHENEMLSLKRLSSF
LKTTDFQLPDEIFGPLKLEKLKSYSEKIVEPIVSKMYAQKHLKEGNCIVLEELTPTQINT
EMKDLEEEIVVLPEKAQPRMPSLTSRSQKKGLSSSILLFTPLNTSAPENSNRPTADMCSP
TFPILGTTPAFGSQALCEKVCTETVRPTCSTPQLPHLKDSDHVLTSAAHILKDSDQKQLD
SWTNLSKPDGTLVVSGREGQPSCDCDSGPQAPPLPTESVPFKDNQLCGNPQPESWKQSTE
QEHSASLTEVAELPACQSSNPGHLQLVSKLKNPSGSCSVDVSAMWWEIAGFKEPCIITAC
EYVVSLWKPLNTLQWEKLYSWHFTEVPVLQIVPVPDVCNLVCVALGNLEIREIRSLLCSS
DGKREKQVLLSSGNIKAVLGLTERRLVSSSGTLCDQQVEIMTFAEDGGSKEKQFLMPPEE
TVLTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIGDRYQASVCLKAYSEMGLLF
VVLSHPCAKESELLGSPVFQLIVINPKTTLSVGVMLYCLPQGQAGRFLEGDVKDHFAAAV
LTSGTIAIWDLLLGHCTALLPPISDQHWSFVKWSGTDSHLLAGQKDGNIFVYRY
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcctcctgggaagcccctcagctgtgaggagaaggaaaagttgaaggaaaaa
ttagcattcttgaaaagggaatacagcaagacactggcccgccttcagcgtgctcaaaga
gctgagaagtttaagaattctattaagaaaacagcagaagaacatgattgcttgcttcag
caggatacttcaccacagctaaaccactcagaatctaaaaataaagtatctccttgtgac
acattgcaaattagcacacatctggatgaagaaactggagaaaagacacctatcacattt
gacattgagcctgagtccttcaaccctgaacatggctctgtggaagaattacatatacaa
agaacaggtgatatccaagaacattttccctactgggtcggtggccctggtgttgagaaa
aggcagagtaagctgccagggagaagaaaaaagcagcagaaaagaacatttacttcgcag
gcaagagactctttgtttgacacagattcactcatactgtctggaaaaagactaaaggaa
caggaagaaaacaatggagaaaatcctaggacacctgtaactaaaagaacttacctttca
agttctatgtctgacattcctggttctccatcaccagtgacggaaactaatgtaaggggt
gtattaattccaccaactgccaaaccacaaagagatgttgatgcactcataagaggaaat
aatttccccatggtgcctacacttgcttcatttactctatcaaatagcagtagcagtcat
caccttgaacataagcctcctaaagatgactgggaacttattactcacagtttaaaaaac
attaaccctgcttcacctgtaaacctagaagcacaagtgaaaaaaattacggtctctaaa
gataacccaggtataagtgcaagtggccagctgcctcaaagtcctgacttagagccagat
aattcatgctctccaaataagctcatttctgataacttactagcagatgaaaaccaaaac
ttaaaaggacagaatcacacagaagagtctttaaaatttccccataacactcttgatggt
agaaatgaaagtcttcaggaaaatgaggttttaagtcaatctaagagtcttagccctgaa
gtaatctctcctgcttctacagaaaatcaaacatattcttgcacagtgcttgaaggcctt
ctatttcccgcagaatattatgttagaacaacacggcgcatgtcaaattgtcagaggaag
gtagccctggaggctgtaattcaaagtcatttgggtgtcagaaagaaagtgtttaaaaat
aaaagtaaagacgcaactaaaaatttaaacctttgcagtgaagagactgaccagagtgaa
attaggacttctgacacatgcacaaaacaatcaagttcaagaagatctcaaaaacatctg
tccttaactgaagtccactctcccactgggccaactgaagataaccttcccaggaaagca
gttaccgagccatctggtggaagacacggaagaaaaagaaagtcaatctgcccacctgta
ttagatcatcatgaactacttttgccaactcctagcacatcaggtgttaatagatccaag
gaagaaatcaccttacacaaagatcagaatgaaaaagtaattattcgggggaagaaagat
cactgtcaaaaagaagactccctttcttccagaaagaatggttatctagctttggattct
gtgttcaaggcttcatttcatgagaatgagatgctaagtttaaagcgactgtcatctttt
ctcaaaaccacagactttcagttacctgatgaaatctttggacctcttaagcttgaaaaa
ctgaagtcctattcagaaaaaatagttgagcctattgtatcgaaaatgtatgcacagaag
catcttaaggagggaaactgtattgttttggaagaattgactcctacacaaattaatact
gaaatgaaggacttggaagaggaaattgtggttctcccagaaaaagcacaacctagaatg
ccaagcctaacaagccggtctcagaagaagggtctttcttcatccatattacttttcact
cctttaaataccagtgcccccgagaacagtaacaggccaacagcagacatgtgttcgccc
actttccccatcttaggcacaactccagcttttggctcccaagcactctgtgaaaaagtg
tgcacagagactgtcagaccaacttgctctacaccccaacttcctcacttaaaagacagt
gatcatgtgctcacttcagcagcacatatactaaaagacagtgatcagaaacaactcgac
agttggaccaacctgtcaaaaccagatggcactctggttgtgtcaggtcgagaaggacag
ccttcctgtgactgtgattctggtccccaggcaccacctcttcccactgagtcagtccct
ttcaaagacaatcagctgtgtggaaatccacagccggagtcatggaaacagtccactgaa
caggaacactctgcttccctgactgaagtagcagagcttcctgcttgtcaaagctcaaac
ccaggccacctccaattggtttcaaagttaaagaatccttctggttcctgttcagtggat
gtgagtgccatgtggtgggaaatagcaggtttcaaagagccatgtatcataactgcctgt
gaatatgtagtttctctttggaaacctctcaatactttgcagtgggaaaaactttattcc
tggcactttacagaggttccagtattacagatagttccagtgcccgatgtttgtaatctc
gtgtgtgtggctttgggaaatttggagatcagagaaatcaggtcattactttgctcctct
gatggtaaacgtgaaaagcaagtactactgagttctggaaatataaaagctgtgcttggc
ctgacagagaggaggctagtcagtagcagtgggaccctttgtgaccaacaagtagaaatc
atgacttttgcagaagatggaggaagcaaagaaaaacaatttttgatgccccctgaagag
actgtattaacttttgctgaggtccaagggatgcaggaagctctgcttggtactactata
atgaacaacattgttatttggaatttaaagactggtcagctcctgaaaaagatgcacatt
ggtgatcgctaccaagcttcagtttgtctcaaagcctattccgaaatggggctcctgttt
gttgttctgagtcatccttgtgccaaagagagtgagctgttgggaagccctgtgtttcag
ctgatcgtgattaaccctaagacaactctgagtgtgggggtgatgctgtactgtcttcct
caagggcaggctggaaggttcctggagggggacgtgaaagatcattttgcagccgcagtg
ttgacttctggaacaattgccatttgggacctacttctgggtcattgtaccgctctcctc
ccacctatctctgaccagcattggtcctttgttaaatggtcaggtacagattctcatttg
ctggctggacaaaaagatggaaatatatttgtataccgctactga
DBGET
integrated database retrieval system
