Nyctereutes procyonoides (raccoon dog): 129520130
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Entry
129520130 CDS
T09008
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04612
Antigen processing and presentation
npo05145
Toxoplasmosis
npo05152
Tuberculosis
npo05164
Influenza A
npo05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
129520130 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
129520130 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
129520130 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
129520130 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
129520130 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
npo01001
]
129520130 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
npo04054
]
129520130 (CIITA)
Enzymes [BR:
npo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129520130 (CIITA)
Protein kinases [BR:
npo01001
]
Serine/threonine kinases: Other
TAF1 family
129520130 (CIITA)
Pattern recognition receptors [BR:
npo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129520130 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
129520130
NCBI-ProteinID:
XP_055197109
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MNHFQTILARVRMLLSSHQPSQVQALLDNMLEKELLSREYHCALLREPDGEALARKISLT
LLEKGDPDLALLRWAWSGWQTPVAEGDPNSSKDHADSGQFAAMELGPLEGGYLELLNSST
DPLQLFHLYDQTDLAREEIELFSEPDMDTINCEQFSRLLCDMEGDEETREAYANIAELDQ
YVFQDSQLEGLGKDIFIEHIGLEDMISETVEVLEEAGHKSQKRPFSEEMPVDLKHRKLAE
PLTVPMVTGTFLVGSVSDPSVLPCLSPPAVFNEQPAPVQSWLGETVLMPVPASGSLLSCL
SLPAGGIQIVPSLPSLPQGLWPISGAGTGVSGMVIYQGEMPQASQVLPSSGPAMQSLPKS
PDRPGSTSPFAPSAADLPGMPEPALTSRANMTEDQLSPPRCVAAHEVSSKPPKLPESVEQ
FCSSLRDKYQAEPAGPDGILVEVELVRARLEKSSSKSQDRELATPDWAERQLARGGLAEV
LLAAGDRRRPRETQVIAVLGKAGQGKSRWAREVSRAWACGQLPQYDFVFYIPCHCLDRAG
DTYRLQDLLFSLGPRPQPVDDEVFGHILRRPDRVLLILDAFEGLEGQDGACGPASTEPQS
LRGLLAGLFQRKLLRGCTLLLIARPRGRLAQSLSKADVVFEVAGFSAQQAETYMTRYLDH
SGATEHRERALALLRSQPFLLSHSHSPTVCQAVCQLSEALLELGDGAELPSTLTGLYVGL
LGPAAQDSPPGALAGLARLAWELGRRHRGTLQESQFPSAEVRAWAVAKGLVRPVPGARDT
ELAFSSFLLQCFLGAVWLALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLLFQ
PHADCLGALAGPAGVTLGDRKQKVLSRYLKRLQPGTLRAGRLLELLHCAHEASDPALWQH
VVQGLPGRLSFLGTRLTPPNAYVLGSALAAAGRDFSLDLRSTGIDPSGLGSLVGLSCVTH
FRAALSDAVGLWESLQQRGETKLLRAVEEKFTIEPFKAKSPKDVEDLGNLVQIQRTRSSS
EDTAGELPAVQDLKKLEFALGSVFGPQAFPKLVKILEAFSSLQHLDLDSLSENKIGDEGV
EQLSATFPRLKALETLNLSQNSITDVGACKLAEALPSLAPSLLRLSLYNNYICDVGAESL
AQVLPDMVSLRVLDVQYNKFTGAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQLD
SRISLR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactttcagaccatcctggctcgggtccggatgctgctgtccagccatcagccg
agtcaagtgcaagccctcttggacaacatgctagagaaggagcttctctcccgggagtac
cactgcgccctgctccgcgagcctgatggcgaggccctggccagaaagatctccttgacc
ctgctggagaaaggagacccagacttggccctcttgaggtgggcgtggagtgggtggcag
accccagtggcggagggggaccccaactcctccaaggaccatgctgacagtggacagttt
gccgccatggagttggggcctctggaaggcgggtacctggagcttctcaacagcagtacc
gatcccttgcagctcttccacctctatgaccagacggacctggctagagaagagattgag
ctcttctcagaacccgacatggacaccatcaactgcgaacagttcagcagactgttgtgt
gacatggaaggtgacgaagagaccagggaggcttatgccaatatcgcggaactggaccag
tacgtgttccaggactcccaactggagggtctgggcaaagacattttcatcgagcatata
ggattagaagacatgatcagcgagactgtggaggtgctagaggaagcaggacacaaaagt
cagaaaagacccttctcagaggaaatgcccgtggacttgaagcacaggaagctagctgag
cccctcactgtacccatggtgaccggcaccttcctggtggggtcagtgagtgacccctcg
gttcttccctgcctgtcaccacctgccgtgttcaacgagcagcccgcacctgtccagagc
tggctcggggagactgtcctgatgccagtacctgcctccggttccttgctgagctgcctg
agtcttcctgctggtggcatccagatcgtccccagcctcccctccctgccccaggggctc
tggcccatctcgggggctgggacaggggtgtctggcatggtcatctatcaaggggagatg
ccccaggccagccaggtgcttccttccagtggcccagccatgcagagtctccccaagtcc
ccagatcggcccggctccaccagcccctttgccccatctgccgctgaccttcctggcatg
ccagaaccagccctgacctcccgtgcaaatatgacagaggaccagctgtcccctccccga
tgtgtggcagctcacgaggtctccagcaagcctccaaaattgcccgagagcgtggagcag
ttctgcagctccctgcgagacaagtaccaggctgagcccgcaggcccggatggcatcctg
gtggaagtggagctggtgagggcacggctggagaagagcagcagcaagagccaggacagg
gagctggccaccccggactgggcggagcggcagctggcccgagggggtctggccgaggtg
ctgctggccgcgggtgaccgccggcggccacgggagacgcaggtgatcgctgtgctgggt
aaagcaggacaggggaaaagtcgctgggcccgagaagtgagccgggcctgggcctgcggc
cagctgccacagtacgacttcgtcttctacatcccctgccactgtctggaccgtgcgggg
gacacgtaccgcctgcaggatctgctcttctccctggggccccggccgcagcccgtggat
gacgaggtctttggccacatcttgaggaggcccgatcgcgttcttctcatcctggatgcc
ttcgaggggctcgaaggccaagacggcgcgtgcggccccgcatccacagagccccagtcc
ctccgagggctgctggccggcctcttccagcgtaagctgctgcgaggctgcaccctgctg
ctcatcgcccggccccggggccgcctggcccagagcctgagcaaggcggacgtcgtgttc
gaggtggccggcttctcggcccagcaggctgagacctacatgacacgctacttggaccac
tctggggccacggagcaccgagagcgagccctggccctcctccgcagccagccattcctc
ctcagccacagccacagccccaccgtgtgccaggccgtgtgccagctctccgaggccctc
ctggagctgggcgacggggccgagctgccctccacgctcacgggactctacgtgggcctg
ctaggccctgcggcccaggacagccccccgggggccctggcgggactggccaggctggcg
tgggagctgggccgcagacaccggggcacgctgcaggagagccagttcccgtcggcagag
gtgagggcctgggccgtggccaagggcttggtgcggcccgtcccgggggcccgagacacg
gagctggccttctccagcttcctcctgcagtgcttcctgggggccgtgtggctggccctg
agcagtgagatcaaggacaaggagttgccacagtacttggcattgaccccgaggaaaaag
aggccctatgacaactggctggagggcgtaccgcgcttcctggccgggctgcttttccag
cctcatgccgactgcctcggagctctggcagggccggccggggtcaccttgggggacagg
aagcagaaagtgctcagcaggtacctgaagcggctgcagccagggacgctccgggccggg
cggctgctggagctgctgcactgtgcccacgaggcctcggaccctgcgctctggcagcac
gtggtgcaggggctcccaggtcgcctgtccttcctgggcacccggctcacgccacccaat
gcctacgtgctgggcagcgccttggcggcggcgggccgagacttctccctggacctccgc
agcactggcatcgacccctctggactggggagcctcgtgggactcagctgtgtcacccat
ttcagggctgcgctgagtgacgcggtggggctgtgggagtctctccagcagcgaggggag
accaagctgctccgggcagtggaggagaagttcaccatcgagcctttcaaggccaagtcc
ccgaaggacgtggaagacctgggcaaccttgtgcagatccagaggacgaggagttcctcg
gaagacacagctggagaactccctgctgtccaggacctcaagaagctggagtttgcgctg
ggctcagtcttcggcccccaggctttccccaaactggtgaagatcctcgaggctttttcc
tctcttcagcatctggacctggactcgctgagtgagaacaagatcggggacgagggtgtg
gagcagctgtcagccaccttcccacggctgaaggccctggagactctcaacctgtcccag
aacagcatcaccgacgtgggcgcctgcaagctcgccgaggccctgccctccctggctcca
tccctcctcaggctgagcctgtacaataactacatctgtgacgtgggagctgagagcctg
gcacaggtgcttccagacatggtgtccctccgggtgttggatgtccagtataacaagttc
acgggcgccggggcccagcagctcgctgccagcctgagaaagtgccctcacgtggagaca
ctggcgatgtggacgcccaccatcccgttcggcgtccatgaacacctgcagcagctggac
tcacggatcagcctgagatga
DBGET
integrated database retrieval system
