KEGG   Nyctereutes procyonoides (raccoon dog): 129520879
Entry
129520879         CDS       T09008                                 
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
npo  Nyctereutes procyonoides (raccoon dog)
Pathway
npo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:npo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129520879 (PRPF38A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:npo03041]
    129520879 (PRPF38A)
Spliceosome [BR:npo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    129520879 (PRPF38A)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    129520879 (PRPF38A)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 129520879
NCBI-ProteinID: XP_055198088
LinkDB
Position
Unknown
AA seq 312 aa
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcgaaccgtacggtgaaggatgcgcacagcatccacggcaccaatcctcagtatctg
gtggagaagatcattcggacgcgaatctacgagtccaagtactggaaagaggagtgcttc
gggctgacggctgaacttgtagtggataaagccatggagttgaggtttgtgggcggtgtc
tatggtggcaacataaagccaactccttttctgtgtttgaccctgaagatgcttcaaatc
cagcctgagaaggatatcattgtggagtttatcaaaaatgaagatttcaagtatgtccgc
atgttgggagcactttacatgaggctgacaggcactgcaattgattgctacaagtattta
gagcctctgtacaacgactatcgaaaaatcaagagccagaaccgaaatggggagtttgag
ctgatgcacgtagatgagttcattgatgaactgctgcacagtgagagagtctgtgatatc
attctaccccggctacagaaacgctatgtgctagaggaagctgagcaactggagcctcgg
gttagtgctctagaagaggacatggatgatgtggagtccagtgaagaggaggaagaggag
gatgagaagttggagagagtgccatcacctgatcatcgccggagaagctaccgagacttg
gacaagccccgtcgttctcccacactgcgctatagaaggagtaggagccggtctcccaga
aggcggagtcggtctcctaaaaggaggagcccctcccctcgccgagaaaggcatcggagc
aaaagcccaagacgtcaccgcagcagatctcgagatagacggcacagatcccgctccaag
tccccaggtcatcatcgtagtcacagacacaggagtcactcaaagtctcctgaaagatct
aagaaaagccacaagaagagccggagagggaatgaataa

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