Nyctereutes procyonoides (raccoon dog): 129521511
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Entry
129521511 CDS
T09008
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129521511 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npo03036
]
129521511 (MBD4)
03400 DNA repair and recombination proteins [BR:
npo03400
]
129521511 (MBD4)
Chromosome and associated proteins [BR:
npo03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
129521511 (MBD4)
DNA repair and recombination proteins [BR:
npo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129521511 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
NUMOD1
DUF6059
Motif
Other DBs
NCBI-GeneID:
129521511
NCBI-ProteinID:
XP_055198997
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MAGMESASLGDCGAAPSVTSPERLAPDRPWDLREEVGALGSERVGEDEKQVLIKSNSERA
SMVSAQTGDTTITECHKTVPCGWERVVKQRLSGKTAGRYDVYFISPQGLKFRSKSSLAKY
LHKNEETSLTPEDFDFSVLSKRGSIKSRYKDCRLAPVTCQMQNESNSSNRNLRTRSRWKK
DVFPLPSGSLELQKSRRLSNSKEDEGVNDVDSRKVRKSKGKVTVLKEIQIKKTKTKCRKG
PPDSTQSNKKRKSEYKKADTESEPVAGESRLDKTLSISDAGASNKTLSVTNEEKRLVKEQ
SLSSGSNFCFEQITSGFINKLCSTEEAEHNKKCQETFLESEEIKVEVGERKEHLHTDILK
CGSEMDNSCSQTEKDSVPVRICQEDTIPRTQIEKRKTSLYFSSKYNKEVLSPPRRKAFKK
WTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVARTADWR
DVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYRIFCINEWKQVH
PEDHKLNKYHDWLWENHEKLSLS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggctgggatggagagtgcgagcctgggggactgcggagctgccccctcggtcacctcc
cctgagcgcttggccccagaccggccctgggacctccgtgaagaagttggtgctctggga
tcagaaagagtgggagaagatgagaaacaagtgctgataaaaagcaacagtgagcgagca
tccatggtttctgctcagactggtgatactacaataaccgaatgccataagactgtccca
tgtggatgggaaagagttgtgaagcaaaggttatcagggaaaacagcaggaagatatgat
gtgtattttatcagcccacaaggactgaagttcagatccaaaagttcacttgctaagtat
cttcacaaaaatgaagagacttctcttacgccagaagattttgattttagtgttctttct
aaaaggggcagcatcaagtccagatataaagactgcaggctagcacccgtgacatgccaa
atgcaaaatgaaagtaacagttcaaaccggaacctcaggacacgaagcaggtggaaaaaa
gatgtctttcctctaccaagtggtagtttggaattgcaaaagagcagaagactgtctaat
tctaaagaagatgaaggtgttaatgatgttgactccagaaaagttagaaagtccaaagga
aaggtgactgttttgaaagaaattcaaattaagaaaactaaaacaaagtgccggaagggt
cctccagattctactcaaagtaataagaaaagaaaatctgagtataaaaaggcagatact
gaaagtgaacctgttgcaggagaaagtcggcttgataaaacactctccatttctgatgct
ggagcaagcaacaagaccctcagtgtgactaatgaagaaaagagacttgtaaaagaacaa
tcattgagttcaggatcaaatttttgctttgaacaaataacttctggctttataaacaaa
ttatgttcaaccgaagaagcagaacacaacaagaaatgtcaggaaacctttttagaatct
gaggaaataaaagtagaagttggggaaaggaaggaacatttgcatactgacattttaaaa
tgtggctctgaaatggacaacagctgttcacaaactgagaaagattctgttcctgtgaga
atatgtcaagaagataccattccacggacacaaatagaaaaaaggaaaacaagcctatat
ttttccagcaaatataacaaagaagttcttagccccccacgacgcaaagcttttaagaag
tggacacctccccggtcaccttttaatctcgtgcaagaaacacttttccatgatccatgg
aagctcctcattgctaccatattcctcaatcggacctcaggcaaaatggcaatccctgtg
ctctgggagtttctagagaagtacccttcggctgaagtagcaagaactgcagattggaga
gatgtatcagaactccttaaaccacttggtctctacgatcttcgagcaaaaaccattatc
aagttctcagatgaatatctaacaaagcagtggaggtatccgattgagcttcatgggatt
ggcaaatacggcaatgactcttaccgaattttttgcatcaatgagtggaagcaggtacac
cctgaagaccataagttaaataaatatcatgactggctttgggaaaatcatgaaaaatta
agtctgtcttaa
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