Nyctereutes procyonoides (raccoon dog): 129521688 Help Entry 129521688         CDS       T09008                                  Symbol PBRM1 Name (RefSeq) protein polybromo-1 isoform X1   KO K11757   protein polybromo-1 Organism npo  Nyctereutes procyonoides (raccoon dog) Pathway npo03082   ATP-dependent chromatin remodeling npo05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:npo00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     129521688 (PBRM1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     129521688 (PBRM1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:npo03021]     129521688 (PBRM1)    03036 Chromosome and associated proteins [BR:npo03036]     129521688 (PBRM1) Transcription machinery [BR:npo03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      129521688 (PBRM1) Chromosome and associated proteins [BR:npo03036]  Eukaryotic type   Chromatin remodeling factors    PBAF complex     129521688 (PBRM1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1 Motif Other DBs NCBI-GeneID:  129521688 NCBI-ProteinID:  XP_055199357 LinkDB All DBs Position Unknown AA seq 1709 aa AA seqDB search MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQ KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD EDDDEDGQDNQGTVTEGSSPSYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPD YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI FYMKKAEIEHHEMTKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRTVQG GRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNN QGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDAGSAKRKSKKNIR KQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELGPLPDDDDVASPKL KLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLT IKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET RRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPSFPNKPP LTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDEL CKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKELEEDKLKREEEKRAEKSEDSSGATGL SGLHRTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWEDSAGEKWLYGCWFYR PNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCE SRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSR TEDSYNLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIE KVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKD FLSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKE PSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTP PQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNL ETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALMGVVPPPTPMGMLNQQL TPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLPPGVPGLPGIPPPGVMN QGVTPMVGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPK TQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHT TMADALWRLRDLMLRDTLNIRQAYNLENL NT seq 5130 nt NT seq  +upstreamnt  +downstreamnt atgaggagactggcttttcgaggcgctggttgtgctctggtaaagctgaagaagttggat tccatgggttccaagagaagacgagctacctccccttccagtagtgtcagcggggacttt gatgacgggcaccattctgtatccacaccaggccccagcaggaaaaggaggagactgtcc aatcttccaactgtagatcctattgctgtatgccatgaactctacaataccatccgagac tataaggatgagcagggcaggctcctctgtgagctcttcattagggcacccaaacgaaga aatcaacctgactattatgaagtggtttctcagcccattgatttgatgaaaatccaacaa aagctaaaaatggaagagtatgatgatgttaatctgttgacggctgacttccagctgctt tttaacaatgcaaaggcctattataagccagattctcctgaatataaagctgcttgcaaa ctctgggatttgtaccttcgaacgagaaatgagtttgttcaaaagggagaagcagatgat gaagatgatgatgaagatggacaagacaatcaaggcacagtgacggaaggatcttctcca agttacttgaaggagatcctggagcagcttcttgaagccatagttgtagccacaaatcca tcaggacgtctcattagtgaacttttccagaaactgccttctaaagtgcaatatccagac tattatgcaataattaaggagcctatagatctcaagaccattgcccagaggatacagaat ggaagctacaagagtattcatgcaatggccaaagatatagatcttctagcaaaaaatgcc aaaacttacaatgagcctggttctcaagtattcaaggatgcaaattctattaaaaaaata ttttatatgaaaaaggcagaaattgaacatcatgaaatgaccaagtcaagccttcgaatg aggacgccatcaaatttggctgcagccaggttgacaggtccttcgcacagtaaaggcagc cttggtgaagagagaaatcccactagcaagtattaccgtaataaaagaacagtccaaggg ggtcgtttgtcagcaattaccatggcacttcaatatggctcagaaagtgaagaggatgct gctttagctgctgcacgttatgaagaaggagagtcggaagcagaaagtattacttcattt atggatgtttcaaaccctttttatcagctttatgacacagttaggagttgtcggaataat caagggcagctaatagctgaaccttttttccatttaccttcaaagaaaaaataccctgat tattatcagcaaattaaaatgcccatatccctacaacagatcagaacaaagctaaagaac caagaatatgaaactttagatcatttggagtgtgatctgaatttaatgtttgagaatgcc aaacgctataatgttcccaattcagccatctacaagcgagttctaaaattgcagcaagtc atgcaggcaaagaagaaggagcttgccagaagggatgacattgaggatggagacagcatg atttcttcagccacctctgatgctggtagtgccaaaagaaaaagtaaaaagaacataaga aagcagcgaatgaaaatcttattcaatgttgttcttgaagctcgtgagccaggttcaggc agaagactttgtgatctgtttatggttaaaccatccaaaaaggactatcctgactattat aaaatcattttggagcctatggacttaaaaataattgagcataacattcgcaatgacaaa tatgcaggggaagaaggaatgatagaagacatgaagctgatgttccggaatgccaggcat tacaacgaggagggctcccaggtgtacaatgatgcgcacatcctggagaagttactcaag gataaaagaaaagagctgggcccgctgcctgatgatgacgatgtggcttctcccaaactc aagctgagtaggaagagtggaatttctcctaaaaaatcaaaatacatgactccaatgcag cagaaactaaatgaagtctatgaagctgtaaagaactatactgataagaggggtcgccgc ctcagtgctatatttttgaggcttccctctagatctgaactgcctgactattatctgacc attaaaaagcccatggacatggaaaaaattcgaagtcacatgatggccaacaaataccaa gatatagactccatggttgaggactttgtcatgatgtttaacaatgcctgtacatacaat gagcctgagtctttgatctacaaagatgcccttgttctgcacaaagttctccttgaaact cggagagacctggagggagatgaagactctcatgtcccaaatgtgactttgctgattcaa gagctcatccacaatctttttgtgtcagtcatgagtcatcaggatgatgaaggaagatgc tacagtgattctttagcagaaattcctgctgtggatcccagcttcccaaacaaacctcct cttactttcgacataattagaaagaatgttgaaaataatcgttaccggcggcttgattta tttcaagagcatatgtttgaagtcttggaaagggcaagaaggatgaatcggacagactct gaaatctatgaggacgcagtagaactacagcagttttttattaaaattcgtgatgaactc tgcaaaaatggagagatcctgctttcaccagcactcagctacaccacaaagcatttacat aatgatgtggagaaagagaaaaaggaaaaattgccaaaagaactagaagaagataaacta aaacgagaagaagagaaaagagctgaaaagagtgaagactcctcaggtgccacaggcctc tccggcttacatcgcacatacagccaggactgcagctttaagaacagcatgtaccacgtt ggagactacgtgtatgtggagcccgcggaagccagcctgcaaccacacatagtctgcatt gagaggctgtgggaagattctgctggtgaaaaatggttgtatggctgttggttttatcgg ccaaatgaaacgttccatctggctacacgaaaatttctagaaaaagaagtttttaagagt gactattacaataaagttcctgttagtaaaattctaggaaaatgtgtggtcatgtttgtc aaggaatactttaaattatgcccagaaaactttcgagatgaggatgtttttgtctgtgag tcacggtattctgccaaaaccaaatcttttaagaaaattaaactgtggaccatgcccatt agctccgttaggtttgtccctcgggatgtgcccttgcctgtggtccgagtggcctctgta tttgcaaatgcagataaaggggatgatgagaagaacacagacaactcagaagacagtcga actgaagacagttataacttggaaaaggagaaagaagatgtccctgtggaaatgtcaaac ggtgaaccaggttgccactactttgagcaactccgttacaatgacatgtggctaaaggtt ggcgactgtgtcttcatcaaatcccatggcctggtgcgccctcgagtgggcagaattgaa aaggtatgggtccgagatggagctgcatatttttatggccctatcttcattcacccagaa gagacagaacatgaacccacaaaaatgttctacaaaaaagaagtatttctgagtaatctg gaagaaacctgccccatgacatgtattctgggaaagtgtgctgtgttgtcattcaaggac ttcctctcctgcagaccaactgaaataccagaaaatgacattctactttgtgagagccgc tacaacgagagtgacaaacagatgaagaaattcaagggactgaagaggttttcactctct gccaaagtggtagatgatgagatttattacttcagaaaaccaattgttcctcagaaagag ccctcacctttgttggagaagaagatccagttgctagaagcaaaatttgctgagttagaa ggtggagatgatgatattgaagagatgggagaagaggatagtgaggtcattgagcctcct tctctacctcaacttcagaccccccttgccagtgagctggatctcatgccctacacaccc ccacagtctaccccgaagtctgccaaaggcagtgcaaagaaggaaggctccaaacggaaa atcaacatgagtggctacatcctgttcagcagtgaaatgagagctgtgattaaggcccag catccagactactctttcggggagctcagccgactggtggggacagaatggagaaacctt gaaacagccaagaaagcagaatatgaagagcgggcagctaaagttgctgagcagcaggag agagagcgagcagcacagcaacagcagccgagtgcttctccccgagcaggcacccctgtg ggggctctcatgggggtggtgccaccaccaacaccaatggggatgctcaatcagcagttg acacctgttgcaggcatgatgggtggctatccgccaggccttccacctttgcagggccca gttgatggccttgttagcatgggcagcatgcagccacttcaccctggggggcctccaccc caccatcttccgccaggtgtgcccggcctcccgggcatcccaccaccgggtgtgatgaac caaggagtgacccctatggtagggactccagcaccaggtggaagtccatatggacagcag gtaggagttttggggcctccagggcagcaggcaccacctccgtatcctggcccacatcca gccggcccccctgtcattcagcagccaacaacgcccatgtttgtagctcccccaccgaag acacaacggcttctccactcagaagcctacctgaaatacattgaaggactcagtgctgag tcgaacagcattagcaagtgggaccaaaccctggcagctcgaagacgcgatgtccatttg tcaaaagaacaggagagccgcctcccctctcactggctgaaaagtaaaggggcccatacc accatggcagatgctctctggcgccttcgggatttgatgctccgtgacaccctcaacatt cgccaagcatacaatctagaaaacctttaa

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