Nyctereutes procyonoides (raccoon dog): 129522514
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Entry
129522514 CDS
T09008
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129522514 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129522514 (XAB2)
03041 Spliceosome [BR:
npo03041
]
129522514 (XAB2)
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129522514 (XAB2)
Spliceosome [BR:
npo03041
]
Complex B
Other components
Prp19-related factors
129522514 (XAB2)
Complex C
129522514 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_NPHP3
TPR_1
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
129522514
NCBI-ProteinID:
XP_055200803
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDEHFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLIGRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECRLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPSRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctgtcccggcccgagcggccggacctagttttcgaagaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctccgtcaagtgctggcttcgc
tacattgagttcaagcaaggtgccccgaagcccaggctcaatcagctgtatgagcgggca
ctaaagctgctgccctgcagctacaaactctggtaccggtacctaaaggcacgccgggca
caggtgaagcatcgctgtgtgactgaccccgcctatgaagatgtcaacaactgccacgag
agggcctttgtgttcatgcataagatgccacgtctgtggctagactattgccaattcctg
atggaccagggccgcgtcacacacacccgccgtacgtttgaccgtgccctccgggcgctg
cccattacacagcactctcgcatctggcccctgtacctgcgcttcctccgctcacaccca
ctgcctgagacggctgtgcggggctaccgtcgctttctcaaactcagccctgagagtgca
gaggagtacatcgagtacctcaaatccagtgaccggctggacgaagctgcgcagcgcctg
gccactgtggtgaatgatgagcattttgtgtccaaggccggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccagacaaggtgcagtcactcaacgtg
gatgccatcatccgcggaggcctcactcgcttcactgaccagctaggcaagctctggtgc
tcgctggctgactactacatccgcagtggccacttcgagaaggctcgagatgtgtatgag
gaggccatccggaccgtgatgaccgtgcgggacttcacccaggtgttcgacagctatgcc
cagtttgaggagagcatgattgcagccaagatggagacagcctcagaactggggcgtgag
gaggaagatgatgtggacctggagctgcgcctggcccgcttcgagcagctcattggccgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccgcaccatgtacacgagtgg
cacaagcgtgtggccctgcaccaggggcgcccccgggagatcatcaacacatacacggag
gctgtgcagacggtggaccctttcaaggctacaggcaagccccacacactgtgggttgca
tttgccaagttttatgaagacaatgggcagctggacgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaaacaggtggatgacctggccagcgtgtggtgtgagtgtggc
gagctggagctccggcacgaaaactacgatcaggccttgcggttgctgcggaaggccact
gcactgcccgcccgacgagccgagtacttcgatggctcggagcctgtgcaaaaccgtgtg
tacaagtcactgaaggtgtggtcaatgcttgccgacctggaggagagcctaggcaccttc
cagtccaccaaggctgtatacgaccgcatcctggacctacgcatcgccacaccccagatc
gtcatcaactatgccatgttcctggaggagcataagtactttgaggagagcttcaaggcg
tatgagcgtggcatctcattgttcaagtggcccaatgtgtctgacatctggagcacctac
ctgaccaaattcatcgcccgctatgggggccgcaagctggagcgagcacgggacctcttt
gaacaggcgctggacggctgccctcccaaatatgcgaagacattgtacctgctgtacgca
cagctggaggaggagtggggcttggcccggcacgccatggccgtgtatgagcgtgccacc
agggccgtggagcccgcgcagcagtatgacatgttcaacatctacatcaagcgtgcagcc
gagatctacggagttacccacacccgcggcatctaccagaaggccatcgaggtgctgtca
gacgaacacgcccgggagatgtgcttgcggttcgcggacatggagtgcaggcttggcgag
attgaccgtgcacgtgccatctacagcttctgctcccagatctgcgaccccaggaccact
ggcgctttctggcaaacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
cgggagatgctgcggatccgccgcagcgtgcaggccacgtacaacactcaggtcaatttc
atggcctcccagatgctcaaggtgtcaggcagcgccacgggcaccgtgtcggacctggcc
cccgggcagagtggcatggatgacatgaagcttctggaacaacgggcagagcagctggca
gctgaagctgagcgggatcagccctcacgggcccagagcaagatcctgtttgtgaggagc
gatgcctcccgggaggagctggctgagctggcgcagcaagccaaccccgaggagattgag
ctgggcgaggatgaggatgaggacgagatggacctggagcccaacgaggtgcggctggag
cagcagagtgtgccggccgccgtgttcgggagcctgaaagaggactga
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integrated database retrieval system
