Nyctereutes procyonoides (raccoon dog): 129522726
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Entry
129522726 CDS
T09008
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129522726 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npo03041
]
129522726 (SF3B1)
03036 Chromosome and associated proteins [BR:
npo03036
]
129522726 (SF3B1)
Spliceosome [BR:
npo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
129522726 (SF3B1)
Complex B
129522726 (SF3B1)
Complex C
U2 SnRNP specific factors
129522726 (SF3B1)
Chromosome and associated proteins [BR:
npo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
129522726 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
129522726
NCBI-ProteinID:
XP_055201018
LinkDB
All DBs
Position
Unknown
AA seq
1372 aa
AA seq
DB search
MSWRVYSVFSYIELSTSGSCSVTCRAAARAPPLGARAESIPQLFFSVAAAASGSAGERQF
RLCVRVDKMAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFA
GYVTSIAATELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKI
ADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQL
AEKAKAGELKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRW
DETPGRAKGSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNR
WDETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPV
LTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGY
KVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDI
QYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLF
NQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVE
GREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVC
KSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAAL
AEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLI
LIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQ
LVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQL
IDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAA
DLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPP
IKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKA
IRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPAL
MNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVV
QHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQ
GLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgagttggagagtgtactctgtcttcagttacattgagctgtctacctcaggcagctgc
tccgtcacgtgtcgcgcggcggcgcgcgcccccccccttggcgcacgcgcagagagcatt
ccccagctatttttctccgtggcagcggcggcgagcggaagtgctggggagcgccagttc
cgtctgtgtgttcgagtggacaaaatggcgaagatcgccaagacccacgaagatattgaa
gcacagattcgagaaattcaaggcaaaaaggcagctcttgatgaagctcaaggagtgggc
cttgattctacaggttattatgaccaggaaatttatggtggaagtgacagccgatttgct
ggatacgtgacatcaattgctgcaactgaacttgaagatgatgacgatgactactcatca
tctacaagtttgcttggtcagaagaagccaggatatcatgcccctgtggcattgcttaat
gatataccacaatcaacagaacagtatgatccattcgctgagcaccgacctccaaagatt
gctgaccgggaggatgaatacaaaaagcacaggcggaccatgataatatccccagagcgt
cttgatccttttgcagatggagggaagacccctgatcctaaaatgaatgctaggacttac
atggatgtaatgcgagaacagcatttaactaaagaagagagagaaattaggcaacagcta
gcagaaaaagctaaagctggagaactaaaagttgtcaatggagcagcagcatcccaacct
ccctcaaaacgaaaacggcgttgggatcaaacggccgatcagactcctggtgccactccc
aaaaagctgtcaagttgggatcaagcagagacccctggacataccccttccttaagatgg
gatgagacaccaggtcgtgcaaagggaagtgagactcctggagcaaccccaggctcaaaa
atatgggatcctacacctagtcacacaccagcgggagctgctactcctggacgtggggat
acaccaggccatgcaacaccaggccacggaggcgcaacttccagtgctcgtaaaaacaga
tgggatgagacccccaaaacagaaagagatactcctgggcatggaagcggatgggctgag
actcctcgaacagaccgaggtggagattcaattggtgaaacaccaactccgggagccagt
aaaagaaagtcacgttgggatgaaacaccagctagtcagatgggtggaagcactcctgtt
ctgacccctggaaagacaccaattggcacaccagccatgaacatggctacccctactcca
ggtcacataatgagtatgactcctgaacagcttcaggcttggcggtgggaaagagaaatt
gatgagagaaaccgccccctttctgatgaagaattagatgctatgttcccagaaggatat
aaggtacttcctcctccagctggttatgttcctattagaactccagctcgaaagttgaca
gcaactccaacacctttgggtggcatgaccggtttccacatgcaaactgaagatagaact
atgaaaagtgttaatgaccaaccatccggcaatctcccatttttaaaacctgatgatatt
cagtactttgataagcttttggttgatgttgatgaatcaacacttagtccagaagagcaa
aaagagagaaaaataatgaagctgcttttaaaaattaagaatggaacacctccaatgaga
aaggctgcattgcgtcagattactgataaagctcgtgaatttggagctggtcctttgttt
aatcagattcttcctctcctgatgtctcctacactggaggatcaagagcgtcatttactt
gtgaaagttattgatcggatattatacaaacttgatgacttagttcgaccatatgtgcac
aagatccttgtggtcattgaaccattgttgattgatgaagattactatgctagagtggaa
ggtcgagagattatttctaatttggcaaaggctgctggtctggctactatgatttctacc
atgagacctgatatagataacatggatgagtatgtccgtaacacgacagctagagctttt
gctgttgtagcctctgccctgggcattccttcattgttgcccttcttaaaagccgtgtgt
aaaagcaagaagtcctggcaagcgagacacactggtattaagattgtacagcagatagct
attcttatgggctgtgctatcttgccacatctcagaagtttagttgaaatcatcgaacat
ggtcttgtggatgagcaacagaaagttcggaccattagcgctttggccattgctgccttg
gctgaagcagcaactccatatggtatcgaatcttttgattctgtgttaaagcctctatgg
aagggtatccgccaacacagaggaaagggtctggctgctttcttaaaggctattgggtat
cttattcctcttatggatgcagaatatgccaactactatactagagaagtgatgttaatc
cttattcgagaatttcaatctcctgatgaagaaatgaagaaaattgtgctgaaggtggtg
aagcagtgttgtggaacagatggtgtagaagcaaactacattaaaacagagattcttcct
cctttttttaaacacttctggcaacacagaatggctttggacagaagaaattaccgacag
ttagttgatactactgtggagttggcaaacaaagtaggtgcggcagaaattatatccaga
attgtggatgatctgaaagatgaagctgaacagtacagaaaaatggtgatggagacaatt
gagaaaattatgggcaacttgggagcagcagatattgatcataaacttgaagaacagctg
attgatggtattctttatgccttccaggaacagactacagaggactccgtaatgttgaat
ggcttcggcacagtggtcaatgctcttggcaaacgagtcaaaccttacttgcctcagatc
tgtggtacagttttgtggcgtttaaataacaaatcagcaaaagtcaggcaacaggcagct
gacttgatctctcgaactgctgttgtcatgaagacttgtcaagaggaaaagttgatgggg
cacttgggtgttgttttgtatgaatatttgggtgaagagtaccctgaagtattgggcagc
attcttggagcactgaaggccattgtaaatgtaataggtatgcataagatgaccccacca
attaaagatctcctgcctagactcacccccatcttaaagaacaggcatgaaaaagtacaa
gaaaattgtattgatcttgttggacgtattgctgacaggggagctgaatatgtgtctgca
agagaatggatgaggatttgctttgaacttctggagctcttaaaagctcacaaaaaagct
attcgtagagccacagtcaacacatttggctacattgcaaaagccattggccctcatgat
gtattggctacacttttaaacaacctcaaagttcaggaaaggcagaacagagtttgtacc
actgtagcaatagctattgtcgccgaaacatgttcacccttcacggtactacctgcctta
atgaatgaatacagagttcctgagctgaatgttcaaaatggagtgttaaaatcactttcc
ttcttgtttgaatatattggtgaaatgggaaaggactacatatatgctgtaacaccatta
cttgaagatgctttaatggatagggatcttgtacacaggcagacggctagtgcggtggtg
caacacatgtcacttggggtttatggatttggttgtgaagattcactgaatcacttgttg
aactatgtatggcccaatgtgtttgagacatctccccatgtaattcaggcagttatggga
gccctggagggcctgagagttgctattggaccctgtagaatgttgcagtattgtttacag
ggtttgtttcacccggcccggaaagttagagacgtgtattggaaaatttacaactctatc
tacattggttcacaggatgcgctcatagcacattacccaagaatctacaatgatgataag
aacacctatattcgttacgaacttgactatatcttataa
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integrated database retrieval system
