Nyctereutes procyonoides (raccoon dog): 129523321
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Entry
129523321 CDS
T09008
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129523321 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npo03021
]
129523321 (TAF5)
03036 Chromosome and associated proteins [BR:
npo03036
]
129523321 (TAF5)
Transcription machinery [BR:
npo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129523321 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
129523321 (TAF5)
Chromosome and associated proteins [BR:
npo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129523321 (TAF5)
STAGA complex
129523321 (TAF5)
TFTC complex
129523321 (TAF5)
SAGA complex
129523321 (TAF5)
SLIK complex
129523321 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
DSE1_N
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
PAC11
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_NOL10_N
ASA1
WD_LRWD1
Tricorn_2nd
Beta-prop_DCAF12
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
Beta-prop_ACSF4
LisH_PAC1
ABM-like
PROPPIN
Late_protein_L2
Motif
Other DBs
NCBI-GeneID:
129523321
NCBI-ProteinID:
XP_055202053
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGTGEGGGGTTNNGPNGGGGNVAAAAASSAG
GDGGTPKPSVAVSAVAPAGAAPVPAAAPEAGAPHDRQTLLAVLQFLRQSNLREAEEALRR
EARLLEEAVAGTGAPGEADGAGTEAASALLSRVTASAPGPAAPDPPGTGASGAPAVSGLA
TGPPAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQ
LFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETML
DFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGS
LAGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQD
PNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDV
TDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKI
LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY
YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN
GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLR
FSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKST
PVVHLHFTRRNLVLAAGAYSPQ
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagccagagggaccg
ccgacgctgctacctccgcaggcgggggacggcactggcgagggtggcggcggcactacc
aacaacggccccaacggcggcggcgggaacgttgcggcggcggcggcgtcgtcggccggc
ggggatggtgggacccccaaaccctcggtggctgtctccgccgttgctccggcgggggcg
gccccggtgcccgccgctgctccggaggccggcgccccccacgaccgacagactctgctg
gccgtgctgcagttcctgcggcagagtaacctccgcgaggccgaagaggcgctgcgccgt
gaggcccggctgctggaggaagcagtggcgggcaccggagccccgggagaggcggacggc
gccggtacggaggcggctagcgcgcttctcagccgggtcacagcctcggcccccggcccc
gcggcccctgaccctccgggcaccggcgcttcgggggcccccgccgtctcgggcttagcg
acaggtcctccggctccggggaaagttggaagcgtagctgtggaagaccagccggatgtc
agtgctgtgctgtcagcctacaaccaacaaggagaccccacaatgtatgaagaatactat
agtggactgaaacacttcatcgaatgttctttggactgccatcgggcagagttatcccaa
ctcttttatcctctgtttgtacacatgtacttggaactagtctacaatcaacatgagaat
gaagcaaaatcattttttgagaagttccatggagatcaggaatgttattaccaggatgac
ctacgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttg
gattttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaag
aggcatcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctac
attgacatctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagt
ttggcaggagaggctaaacgagaggcaaacaaatcaaaggtattctttggtttattaaaa
gagccagaaattgaggtgcctttggatgatgaagatgaagaaggagaaaatgaagaagga
aaacctaaaaagaagaaacctaaaaaagatagcattggatccaaaagcaaaaaacaagat
cctaatgctccacctcaaaacagaatccctcttcctgagttgaaagattcagataaattg
gataagataatgaatatgaaagaaaccaccaaacgagtacgccttgggccagactgttta
ccctccatttgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtc
actgatgattctagtttgattgctggaggttttgcagattcaactgttagagtatggtct
gtgacacccaaaaagcttcgtagtgttaaacaagcagcagatcttagcctcatagacaaa
gaatcagatgatgtcttagaaagaataatggatgagaaaacagccagtgagttgaagatt
ttgtatggtcacagcgggcctgtctatggagccagcttcagtccagacaggaactacttg
ctttcttcttcagaggatggaactgttagattgtggagtcttcaaacatttacttgcttg
gtgggatataaaggacacaactacccagtatgggacacacagttttctccatatggatat
tacttcgtgtcagggggccatgatcgagtagctcggctctgggctacagaccactaccag
cctttaaggatatttgctggccatcttgctgatgtgaattgtaccaggttccatccaaat
tctaattatgttgctacgggctctgcagacagaactgtgcggctctgggatgtcttgaat
gggaactgcgtaagaatattcactggacacaagggaccaattcattccttgacattttct
cccaatgggagattcctggctacaggagcaacagatggcagagtactcctttgggatatc
ggacatggtttgatggttggagaattaaaaggccacactgatacagtctgttcacttagg
tttagtagagatggtgaaattttggcctcaggttcaatggataatacagtccggttgtgg
gatgctgtcaaagcatttgaagatttagagaccgatgactttactacagccactgggcat
ataaatttacctgagaattcacaggagttactgttgggaacatatatgaccaaatcaaca
ccagttgtacatctccattttactcgaagaaacttggttctagctgcaggagcttatagt
ccgcaataa
DBGET
integrated database retrieval system
