Novosphingobium sp. PP1Y: PP1Y_AT1028
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Entry
PP1Y_AT1028 CDS
T01515
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PP1Y_AT1028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT1028
DNA repair and recombination proteins [BR:
npp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PP1Y_AT1028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
CCA91080
UniProt:
F6IFK5
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Position
115022..117625
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AA seq
867 aa
AA seq
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MTSGATPMMAQYLALREEAGDCLLFYRMGDFFELFFEDAKRASQILDIALTTRGEHQGAP
IPMCGVPVHSAESYLARLIKAGCRVAIAEQTETPAQAKKRGGSKALVARDIVRFVTAGTL
TEEALLEPRRANVLAAACDVRGTVGIAACDISTGRVELEECAPERLGAALARLGASELVV
PEGWELAPDEAIARSGHEFSSEGGEERLKVIHGVATLDGFGSFTRPMLAAAGGLIAYLDH
VGRGALPLLLPPEARSGEAALAMDEATRASLEILESSQGGRKGSLIDAVDRCVTGAGARQ
LADDLSAPLTDRLAIAERLELVEWLHVDALLREDLRSALRALPDVGRALGRVVAGRGSPR
DLGQLRDGLSGAREIGARLGERDALPGLLERLLPDLGGHGELVDHFARALVASPPTERGQ
GGYIAEGYDAALDELRVTSGNARRAIAALEAKYRDETGVAALKIKHNNVLGYFIEVPSRH
ADKLMEADSGFSHRQTMAGAMRFNALALHEEASRITEAGAHALAAEEAHFEELVAGAVTS
RHRIAKTAAALARIDVAAGQAERAAEGGWTRPEVVDATCLEIEGGRHPVVEAALAVQGER
FVANDCRLGTHDRLWLIGGPNMGGKSTFLRQNALIVLLAQAGGFVPAAAARIGMVDRLFS
RVGASDNLARGRSTFMVEMVETAAILAQATDRSFVILDEVGRGTSTYDGLALAWAVAEAV
HETNRCRCLFATHYHELARLAETCEALSLHHVRAREWKGDLVLLHELADGPADRSYGLAV
ARLAGVPPKVISRAKSVLEKLEKGRAETGGLAAGLGELPLFAAAQDHREEQCDALRDKLR
DMDVDAMSPRDALEVLYDLKREAGTET
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgacttccggcgcaaccccgatgatggcccagtacctcgccctgcgggaagaagcgggc
gactgcctgcttttctaccgcatgggagacttcttcgaactcttcttcgaagatgccaag
agggcatcgcagatactcgacatcgcgctgaccacgcgcggtgagcatcagggcgcgccg
atcccgatgtgcggcgtgccggtccattcggccgagagctaccttgcccgcctgatcaag
gccggttgccgcgtcgccatcgccgagcagaccgagactcccgcccaagccaagaagcgc
ggcgggtccaaggcgctggtggcccgcgatatcgtccgcttcgtcaccgccggaaccctg
accgaggaagccctgctcgaaccgcgccgcgcaaacgtgctggcagcagcctgcgacgtg
cgcggcacggtgggcattgccgcctgcgacatttccaccggacgggtggaactggaagaa
tgcgcgcccgagcgccttggcgccgcactggcgcggctgggcgcgagcgaactggtagtg
cccgagggttgggaactggcgcccgacgaggctatcgctcgctcggggcatgagttctcc
tcggaaggcggggaagagcggctcaaggtcatccacggcgttgccacgctcgacggcttc
ggcagcttcacgcggcccatgctggcagcggcaggcgggctcatcgcctacctggatcat
gtcgggcgcggtgcgttgccgcttctgctgccgcccgaggcgcgctcgggcgaagccgcg
ctggcgatggacgaggcaacgcgggcgagcctggagatcctcgagtcctcgcaaggcggg
cgcaagggcagcctgatcgatgccgtcgaccgctgcgttaccggtgccggcgcgcgccag
cttgccgatgacctgtccgctccgctgaccgaccgccttgccatcgccgagcggctcgaa
ctggtcgaatggctgcatgtcgatgccttgctgcgcgaagacctgcgctccgccttgcga
gcgctgcccgatgtcggccgcgcgctcgggcgggttgtcgccgggcgcggcagcccgcgc
gacctcggccagctgcgcgacggtctgtccggcgcccgcgagatcggcgcaaggcttggt
gagcgcgatgcgcttcccgggctgcttgagcgcctgctgcccgaccttggcggccacggg
gaactggtcgaccatttcgcccgtgcgctcgtcgcctcgccgccgaccgaacgcgggcag
ggcggctacatcgccgaagggtatgatgccgcgctcgacgaactgcgtgtcacatcgggc
aatgcccggcgagcgatcgccgcgctcgaagcgaagtaccgggacgaaaccggcgtcgcc
gcgctcaagatcaagcacaacaacgtgctgggctacttcatcgaagtgccctcgcgccat
gccgacaagctgatggaggcggacagcggcttctcgcaccgccagacaatggccggggca
atgcgcttcaatgcgctggcgctgcacgaggaggcgagccgcatcaccgaggcaggcgcc
cacgcgcttgccgccgaggaagcgcatttcgaggaactggtcgctggggccgtcacttcc
cgccaccggatcgcgaagacagcggctgcgcttgcccgcatcgacgttgcggcggggcag
gccgaacgcgccgcggagggcggctggacccgcccggaagtggtcgacgcgacctgcctc
gagatcgagggcggccgccatccggtggtggaggcggcgctggcggtgcagggcgaacgc
ttcgtggcgaacgactgtcggctgggcacgcacgaccgtctctggctgatcggcggcccc
aacatgggcggtaagtcgacgttcctgcggcaaaacgcgctgatcgtcctgctggcgcag
gcgggcggcttcgtccccgccgcagcggcccggatcggcatggtcgatcgcctgttcagc
cgtgtcggcgcctcggacaacctcgcgcgcgggcgttcgaccttcatggtcgagatggtc
gagaccgccgcgatcctcgcgcaggcaaccgaccgcagcttcgtgatcctcgatgaggtc
gggcgcgggacgtccacgtacgacggtctcgcgctggcctgggccgtggccgaagcggtg
cacgaaaccaaccgctgccgctgcctgttcgcgacgcactatcacgaactcgcgcggctg
gcggagacctgcgaggcgctttcgctgcaccatgtccgggcgcgcgaatggaagggcgac
ctcgtgctgctccatgaactggccgacggccctgccgaccgcagctatggccttgccgtg
gcgcgcctggccggggtgccgcccaaggtcatcagccgtgccaagtcggttctcgagaag
ctggaaaaggggcgggccgagaccggcgggctggcggcgggccttggcgaactgccgctt
ttcgccgcagcgcaggaccaccgcgaggagcagtgcgacgccctgcgggacaaactgcgc
gacatggacgtggatgccatgagcccgcgcgatgcgctggaggtgctctatgacctgaag
cgcgaggcgggtaccgaaacttaa
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