Novosphingobium sp. PP1Y: PP1Y_AT10511
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Entry
PP1Y_AT10511 CDS
T01515
Name
(GenBank) putative TonB dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT10511
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT10511
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CCA91978
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Position
1130962..1133190
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AA seq
742 aa
AA seq
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MAQDSATGPEADSAGESNVIVVTTRKRSEKLQDVPLAISAYSGKDLTEKGISSLADLAAS
TPGLAFQDVNGAYAAPVLRGVAQIDQTGPQGNVGIFIDGVYLNNRSALAFDQYDLARIEV
VKGPQSALYGRNTFAGAINYVTEQPDPTKFSGHATFTLGNFDRHEAKGAINLPIASGVAV
RVFGGFSEFDGTIKNDLDGEYLDGWKDRWSAGAAVKAEITDNLTLDLFGVRSETKNDQPS
LYALPTTLNNCGSTTTVNGQPFYTFFCGKVPYPTEFNLDDKTAFGLTGSNEVYYGKLSYS
GEVLDATALVSYTTAKFALLIDTTGNPDAINSPLFGGLSRQLFTNAATDKSTDWNYDLRF
ASKPGAPLSWMVGVNYYDSLVSDILTLNFQTLGTEPGTSFPPVYSSRGGILKTKGHAIYG
MLGFEITPQFNIQGELRYTIDDQDFSGTGSALGVEGHQTFKYLTPRLSVNWKPSTDLLVY
ATAARGVKTGGFNANAAATEYFTYGAETNWTYEAGVKTSWLGGALTINADVFYVDWKDIN
AQKQLPFSTLSVVGNNGNAEVKGIEGQIAYNLTRNIQLTASGALLDPKYKNGVIDGEVSF
ICGELANSTVDESMCTSSVGGNQIARTSDKQFALGGAWTIPDIVDGLDGYVRADYSWQAG
KYSTSLNMQNQGSISLLNARAGLKFGNYELAIWAKNLLQDKYIARTTVVSSTADGGPTSG
VSYTRIYPGQRRTIGADLSVRF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggattcggccaccggtccggaggccgattcagccggtgagagcaacgtcatc
gttgtcaccacccggaagcgctcggaaaagctgcaggacgtgccgctcgcgatttcggcc
tattcgggcaaggatctgacggagaagggcatctcctcgctcgccgatcttgccgcctcg
accccgggcctggccttccaggacgtcaacggcgcctatgccgcgccggtactgcgcggc
gttgcgcagatcgaccagaccggaccgcagggcaatgtcggcatcttcatcgatggcgtc
tatctcaacaaccgttcggcgctggccttcgaccagtacgaccttgcccggatcgaagta
gtcaagggcccgcagagcgcgctctacggtcgcaataccttcgccggtgcgatcaactac
gtgaccgagcagcccgacccgacgaagttctcgggtcacgccaccttcaccctgggcaat
ttcgatcgccacgaagccaagggcgcgatcaacctgccgatcgccagcggcgtagccgtg
cgcgtgttcggcggcttctccgagttcgacggaacgatcaagaacgacctcgacggggaa
tacctggacggctggaaggaccgctggagcgcaggcgccgccgtgaaggccgagattacc
gacaatctcacgctcgacctgttcggcgtgcgttcggaaaccaagaacgaccagccttcg
ctttatgcgctgccgaccacgctgaacaactgcggttcgaccacaacggtcaatggacaa
cccttttacacgttcttctgcggtaaagtgccctatccgaccgagttcaatctcgacgac
aagaccgcattcggcctgaccggttcgaacgaagtttactatggcaagctgtcctattcg
ggcgaggtgctcgatgcgactgcgctggtgagctacaccactgccaagttcgcgcttctg
atcgacacgaccggcaatccagatgcgatcaattcgccgttgttcggcggcttgtcgcgc
cagctcttcaccaatgcggcgacggataagtccaccgactggaactacgacctgcgtttt
gcatcgaagcctggcgcgccgctatcgtggatggtcggcgtcaattactacgactcgctg
gtctccgacatcctgacgctcaacttccagacgctcggtacagagcccggcacgagcttc
ccgccggtctattcgagccgtggcggcattctcaagaccaagggtcatgccatctatggc
atgctcggtttcgagatcacgccccagttcaacatccagggcgaactgcgctataccatc
gacgatcaggacttcagcggaaccggctcggcgctcggcgtcgaagggcaccagaccttc
aagtacctgaccccgcgcctctcggttaactggaagccgagcaccgacctgcttgtctat
gcgacggcggcccgcggcgtgaagaccggcggcttcaatgccaacgcggccgccaccgaa
tacttcacctacggcgcggaaaccaactggacctacgaggccggcgtgaagaccagctgg
ctgggcggcgcgctgaccatcaatgccgacgtcttctacgtcgactggaaggacatcaat
gcccagaagcagttgccgttctcgaccctctcggtggtcggcaacaacggcaatgccgag
gtcaagggcatcgaggggcagatcgcctacaatttgacccgcaacatccagctcaccgcc
agcggcgcactgctcgatccgaagtacaagaatggcgtgatcgacggcgaagtctcgttc
atctgcggcgaactggcgaactcgacggtcgacgaaagcatgtgcacctcgtcggtcggc
ggcaaccagatcgcgcgcacctcggacaagcagttcgcgctgggcggggcctggaccatc
cccgatatcgtcgatggcctcgacggctatgtccgggcggattacagctggcaggcaggt
aagtactcgaccagcctcaacatgcagaatcagggatcgatctcgttgctcaacgctcgc
gccggcctcaagttcggcaactatgagctcgcaatctgggcgaagaacctgctgcaggac
aagtatatcgcccgcacgaccgtcgtatcctcgacagccgacggcggcccgacttcgggt
gtgagctacacccgcatctatcccggccagcgccggaccatcggtgcggacctttcggta
cgcttctga
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