Novosphingobium sp. PP1Y: PP1Y_AT10647
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Entry
PP1Y_AT10647 CDS
T01515
Name
(GenBank) TonB-dependent receptor, putative
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT10647
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT10647
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CCA91990
LinkDB
All DBs
Position
complement(1144689..1146821)
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AA seq
710 aa
AA seq
DB search
MGGDIVVTARKREETIQSIPAAVSAVTQETLTRAGAQSLDDVARLTPGLTFNSGNAGGLA
APTMRGITNITSTTFDNNVGVFLDGVYMSSKSNLDIDLYNLARVEVIKGPQSALYGNNAF
AGAINYVLDRPKDYLTGQIKASVGTDSLYEVAGKISVPITRSLSIMGVGTYSHFGGTIKN
VQGSNLGGWDHKISASGMIDYHPESDFSASLFYYHYEDELDGGANYMFTNDCGGTISPTI
LPNRGGSTLRFKCGTLQAPDEVDVDSASYSKRKTNLVIGRMAYEFGPVTLRYTGSYAKYD
TIALQDQHLNSYGGTLSSAQRRFTRPFVGPVREWSSEVRLESYDNAFLDWAAGGYYYDRA
ANQTVVVGNSPEQVSRSLDLNNDENATMKSVFGLVNFKFTPTFNIETQGRWTWEDKDAVL
TNNLTGLVRTPKADFSYGTYRVTANWEWNPDRMLYAVVASGTKSGGFNNTSVLSEQSYGP
EKNTSFEIGSKNTFLGGRVIMNVAAYYVDWNDLQISVPSSVTGQTNPVTNIGSATVKGFE
FSTAVKPSPNWDVSFGYNYADSTWDDGTIDYSSSRICPTAADCGLTPAGSGIDVGGFQIP
RTSKHQFSAATNYTIPLATSELYLHADMSYRSEQATNAIALQKVPQQTLVNARIGWIKDG
YELSVFAKNLFDKNYIVSSINEPEFFPSTTFTTGFVGNGRVIGATVEAKF
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcgacatcgtcgtcaccgcccgcaagcgcgaggaaacgatccagtcgatcccc
gccgcggtcagcgccgtcacgcaggaaaccctgacccgcgccggcgcccagtcgctcgac
gacgtcgcccgcctcacaccgggcctgaccttcaactcgggcaatgccggcggcctcgcc
gccccgacgatgcgcggcatcaccaacatcacctcaaccaccttcgacaacaacgtcggc
gtgtttctcgacggcgtctacatgtcgtccaagtcgaacctcgacatcgacttgtacaac
cttgcccgggtcgaggtgatcaagggcccgcaaagtgcgctttacggcaacaacgccttt
gccggcgcgatcaactacgttctcgaccggcccaaggactacctgaccggccagatcaag
gcatcggtcggcaccgacagtctctatgaagtggcgggcaagatctccgtcccgatcacc
aggtcgctcagcatcatgggcgtcggcacctattcgcacttcggcggcaccatcaagaac
gtgcaaggttcgaacctgggtggctgggaccacaagatctcggcctcgggcatgatcgac
taccacccagaatccgatttttccgcctcgctgttctactaccactatgaggacgagctc
gacggcggcgcgaactacatgttcaccaacgactgcggcggcacgatctccccgacgatc
ctgcccaatcgcggcggcagcacacttcgcttcaagtgcggcacgctgcaggctcccgac
gaggtcgacgtcgattccgcgtcctactcgaagcgcaagaccaaccttgtgatcggacgc
atggcctacgaattcgggccggtcacgctgcgctacaccggatcctatgccaagtacgat
acgatcgcgctgcaggaccagcacctcaacagctacggcggcacgctctcttcggcgcag
cgccgctttacccgccccttcgtcggaccggttcgcgaatggagcagcgaagtccggctc
gaatcctacgacaacgcattcctcgactgggcggcaggcggctactactatgaccgcgcg
gcgaaccagaccgtcgtcgtcggcaacagccccgagcaagtgagccggtcgctcgacctc
aacaacgacgaaaatgcgacgatgaaatcggtcttcgggctcgtgaacttcaagttcacc
ccgaccttcaacatcgaaacgcagggacggtggacctgggaagacaaggacgcggtcctt
accaacaacctgaccggccttgtccgcacccccaaggcagacttctcctacggcacctac
cgcgtaaccgcgaactgggaatggaaccccgaccgcatgctctacgcggtcgtcgccagc
ggcaccaagtccggcgggttcaacaacacctcggtcttgtccgaacagtcgtacggcccc
gagaagaatacctccttcgaaatcggttccaagaacacgttcctgggcggtcgcgtgatc
atgaacgttgcagcctactacgtcgactggaacgatctgcagatctcggtcccttcctcg
gtcaccggccagaccaaccctgtcaccaacatcggatcggctaccgtcaagggtttcgag
ttctcgaccgcggtcaagccgtctccgaactgggacgtcagcttcggctacaactacgcg
gattccacctgggatgacggcacgatcgattacagctcctcgcgaatctgcccgaccgcg
gcggactgcggcctgaccccggcagggtccggcatcgacgtgggcggcttccagatcccg
cgcacatcgaagcaccagttctcggcggcaaccaactacaccattccgctcgcgacctcg
gagctctacctgcacgcagacatgtcctatcgctcggagcaggcgaccaacgcgatcgcc
ttgcagaaggtcccgcagcagaccctcgtcaatgcccgcatcggctggatcaaggacgga
tacgagctttcggtctttgccaagaacctgttcgacaagaactacatcgtttcgtcgatc
aacgaaccggagttcttcccctcgaccaccttcacgaccggtttcgtcggcaatggccgc
gtgatcggcgccactgtcgaggccaagttctga
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