Novosphingobium sp. PP1Y: PP1Y_AT10889
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Entry
PP1Y_AT10889 CDS
T01515
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT10889
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT10889
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CCA92013
LinkDB
All DBs
Position
complement(1169984..1172308)
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AA seq
774 aa
AA seq
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MLAFASNSAHAAEAEAQAPTPGETGITDIVVTAERREVSLQEAPLSVSAVTSETLKAANI
TDITGLNGSVPGLVVARSGGGERIITIRGIGSETPENTNTQPGVSYHIDGVYIFNSIAAS
AAFIDVAQVEVLRGPQGTLFGQGSTGGTINVVSIEPSTDALSGNVSAGIGNYKYMEGSGA
LNVPLSDTLAIRGAIQYTKHDGYAYATKVPGVDKYDLDDQDETGWRIGAKWSPAPNFSIT
LNTVQYDSKTNGPAQKNILDPDTDPRVLTQDYPGRSEVKTELYTGVIKWETPFATIKSIT
GYQKLHSEQAWDADGLDTELFFANTYNPISFTGVSYDHVPLWASDTESWSQEINMTSNGN
GPFNWVLGGVYLHSKNSQYINEYRSYDDNFLQPALPVDTAFDDPLVGNLTYAELSSIKRE
LYAFFAQGTYEVTSQLKLTAGVRYNHDKASGAYDSLSGGTSNQTSGAYMQPASTGSRKAD
AWTGKVALDYQITPENMVYASWTRGFKPGGINSASASGGSFSVLPTYKQETVDSFEAGTK
NRFMDDTLQINASAFLYQYKNMQFLEEDPILYGEGISNAPKARVYGLELESTYVPTDGLR
FDASLSWLEGKFTSHYAALDPTAATDAQNAAGYPDYLFWTNFYNAVLARDAARADIKGNR
IPKLPRWQGTIAATYNAEVGPGELTTRAQLIYRGKYQYRLFNDGAVDLTPSYTQVNLMAK
YEPEGTNTDITLRVINLFDEDGVNSRFSDPYGSAQVFDTYIPPRQVILSFGYRF
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcattcgcatcgaatagtgcccatgccgccgaggccgaagcccaggcaccgacg
ccgggggaaaccggcatcaccgacatcgtcgtcacggccgagcgccgcgaggtgagcctt
caggaggccccgctctcggtcagcgctgtcacttccgaaacgctcaaggcggcaaacatc
accgacatcaccggcctcaacgggtcggtgcccggtctcgtggttgcgcgcagcggtggc
ggcgaacggatcatcaccatccgcggcatcggatccgaaacgccggagaacaccaacacg
cagccgggcgtctcctaccacatcgacggggtctacattttcaactcgatcgccgcgagc
gcagccttcatcgacgttgcccaggtcgaagtcctgcgcggcccgcaggggaccctgttc
ggccagggttcgaccggcggcacgatcaacgtcgtctcgatcgaaccgagcaccgatgcg
ctgtccggcaacgtcagcgccgggatcggcaactacaagtacatggaaggctccggcgcg
ctcaacgtaccgctgagcgacacgctcgcgatccgcggcgcgatccagtacaccaagcac
gacggctacgcctatgcgaccaaggtccccggcgtcgacaagtacgacctcgacgatcag
gacgagaccggctggcgcatcggcgccaagtggtcgcccgcgccgaacttctcgatcacg
ctgaacacggtgcagtacgacagcaagaccaacggcccggcacagaagaacatcctcgat
cccgataccgatccgcgcgtcctgacgcaggactatcccggcaggtcggaggtgaagacc
gagctttataccggcgtgatcaagtgggagacccccttcgccacgatcaagtcgatcacc
ggctaccagaagctgcattccgagcaggcatgggatgccgacgggctcgataccgagctc
ttttttgccaacacctacaatccgatcagcttcaccggcgtcagctacgaccacgttcct
ctctgggcttccgataccgagagctggagccaggaaatcaacatgacctcgaacggcaac
ggtccgttcaattgggtcctgggcggcgtctacctgcactcgaagaacagccagtacatc
aacgagtaccgcagctacgacgacaacttcctgcagcccgcgctgccggtcgatacagcc
ttcgacgatccactggtcggcaatctcacatacgccgagctatcgtcgatcaagcgcgag
ctttatgccttcttcgcgcagggcacctacgaagtgacgagccagctcaagctcacggca
ggcgtgcgctacaaccacgacaaggcctcgggagcctatgacagcctgtcgggcgggacg
tccaaccagacttcaggcgcctacatgcagccggcatccactggcagccgcaaggccgat
gcctggaccggcaaggttgcgctggattaccagatcaccccggaaaacatggtttatgca
agctggacccgcggcttcaagccggggggcatcaactcggcttcggcttcgggcggcagc
ttctcggtcctgccgacctacaagcaggagaccgtggactccttcgaggccggcaccaag
aaccgcttcatggacgacacgctgcagatcaacgcttcagccttcctctaccagtacaag
aacatgcagttcctcgaggaagatccgatcctctacggcgagggcatcagcaatgcgccc
aaggcgcgggtctatggcctggaactggaaagcacctacgtgccgaccgacggtctgcgc
ttcgacgcttcgctgtcctggctggagggcaagttcacctcgcactacgcagcgctcgat
cccaccgcggcgaccgatgcgcagaacgcggcgggctatcctgactacctgttctggacc
aacttctacaacgcggtccttgcccgcgatgccgcgcgcgccgacatcaagggcaaccgc
attcccaaactgccgcgctggcagggcaccattgccgcaacctacaatgctgaggtcggc
cccggagaactcaccacccgcgcgcagttgatctatcgcggcaagtaccagtaccgcctg
ttcaacgacggcgccgtcgacctcaccccgtcctacacgcaggtcaacctgatggcgaag
tacgagccggaggggaccaacaccgacatcaccctgcgcgtgatcaacctgttcgacgag
gacggcgtgaactcgcgcttctccgatccctatggcagcgcgcaggtgttcgacacctac
atcccgccacggcaggtgatcctctcattcgggtatcgcttctga
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