Novosphingobium sp. PP1Y: PP1Y_AT11028
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Entry
PP1Y_AT11028 CDS
T01515
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00280
Valine, leucine and isoleucine degradation
npp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PP1Y_AT11028
Enzymes [BR:
npp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
PP1Y_AT11028
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
CCA92025
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All DBs
Position
1185758..1187239
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AA seq
493 aa
AA seq
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MSGDLYSRFARSFGVFADRILVEDGQRCWTYREVEQEAGRLAARLQALGVAPGERVLVQT
DKNVETLILYIAAIRAGAIYLPLNVDYTEAELTYFASDATPVLAVCRDRSTGLFERIGGG
KMQVTTLERLFADMPQEAAAPVPRQSDDIAAILYTSGTTGKPKGAMLTQDNLASNGEMLI
EFWRFTPDDRLIHALPIFHVHGLFVAVHCVLFSGASMVFLPKFESGRVIELMAHSTVLMG
VPTFYIRLLADPAFTREAASNMRLFISGSAPLSVDIHRAFEARCGHRVLERYGMTETGML
TSNPYDGERRAGFVGPPLPGVSLRIADFETGTVLPQGEVGIVEVQGRNIFKGYWQMPEKT
AAEFRPDGWFITGDMGVIDAEGYVQLVGREKDLIISGGLNVYPAEVEALLDDRDDVAEAA
VIGVPHPDFGEAVVAVVQPAGAFDPDAVREDLRKDLAAFKVPKTILTLDALPRNTMGKIQ
KKLLREQFAGLFA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgggcgatctctattcacgctttgcgcgcagtttcggtgtgttcgcggacaggatt
ctggtcgaagacgggcagcgttgctggacctatcgcgaggttgaacaggaggctggacga
ctggccgcgcggctgcaggcgctgggcgtggcgccgggcgagcgggtgttggtgcagacc
gacaagaacgtcgagacgctgatcctctacatcgccgcgatccgggccggggcgatctac
ctgccgctcaacgtcgactataccgaagccgagctgacctattttgccagcgatgcaacg
cctgtcctggccgtctgccgcgatcggagtaccgggcttttcgagcgcatcggcggcggc
aagatgcaggtgacgacgctcgaacggctcttcgccgacatgccgcaagaggcggcggcg
cccgtgccgcgccagagcgacgacatcgcggcgatcctgtacacttcgggcacgaccggc
aagcccaagggagctatgctgacccaagacaacctagcttcgaacggcgaaatgctgatc
gaattctggcgtttcacgcctgacgaccggctcattcacgccttgccgatcttccatgtc
cacggcctgttcgtggcggttcactgtgtactcttctcaggcgcctcgatggttttcctg
ccgaagttcgaaagcgggcgggtgatcgagctgatggcgcattcgaccgtgctgatgggg
gtgcccacgttctacattcgtttgcttgccgatcctgcattcacgcgcgaggcggcgtcg
aacatgcgcctgttcatctccggctcggccccgctctctgtcgacatccatcgcgcattc
gaggcacgctgcggccaccgcgtccttgagcgttacgggatgaccgagaccgggatgctc
acatccaatccctatgacggtgagcgccgcgccggctttgtcggtccgccgcttcccggc
gtttcgctgcgcattgccgacttcgagaccggcacggtgctgccccagggggaagtcggt
atcgtcgaagtccaggggcgcaatatcttcaagggatattggcaaatgcccgagaagacc
gcggccgagtttcggcccgacggctggttcattaccggcgacatgggggtgatcgatgcc
gagggctacgtccagctggtcgggcgcgagaaagacctgatcatctccggcggcctcaac
gtctacccggccgaagtggaagccttgctggacgaccgcgatgacgtggccgaagccgcc
gtgatcggcgtgccccatcccgacttcggcgaggcggtcgtcgccgtggtccagcccgcg
ggagcattcgatcccgatgcggtgcgcgaggacctgcgcaaggatctggcggcgttcaag
gtgccgaaaaccattctgaccctggatgcgttaccgcgcaacacgatgggcaagatccag
aaaaagctcttgcgcgaacagttcgccgggctcttcgcttga
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