Novosphingobium sp. PP1Y: PP1Y_AT11212
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Entry
PP1Y_AT11212 CDS
T01515
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npp03021
]
PP1Y_AT11212
03009 Ribosome biogenesis [BR:
npp03009
]
PP1Y_AT11212
Transcription machinery [BR:
npp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PP1Y_AT11212
Ribosome biogenesis [BR:
npp03009
]
Prokaryotic type
rRNA transcription factors
PP1Y_AT11212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_2
KH_1
HHH_5
KH_NusA_C
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
CCA92046
UniProt:
F6IKU4
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All DBs
Position
1202874..1204508
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AA seq
544 aa
AA seq
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MASAISANRAELLAIANSVASEKMIDKSIVIEAMEEAIQKSARNRYGAENDIRAKLDPRT
GDLRLWRVVEVVEHVEDYFKQVDLKQAEKLQKDAKIGDFIVDPLPPVDLGRIDAQSAKQV
IFQKVRDAERDRQYEEFKDRAGEVITGVIKSVEFGHVIVNLGRAEGVIRRDQQIPREAAR
VGERVRALVLRVERQNRGPQIFLSRAHPEFMKKLFAQEVPEIYDGIIEIKAAARDPGSRA
KIGVISHDHSIDPVGACVGMKGSRVQAVVQELQGEKIDIIPWSEDTATFVVNALQPATVS
RVVIDEEESRIEVVVPDDQLSLAIGRRGQNVRLASQLTGSQIDIMTEAEASEKRQKEFTE
RSKMFEDELDVDETLSQLLVAEGFTELEEVAYIELSELAAIEGFDEELAEELQSRAHEAL
ERREEAAREERRALGVEDAVAELPHLTEAMLVTLGKGGIKTLDDVADLATDELIAKKRSE
QRRRDGSVNRRAREEDKGGVLGEYGLTEEQGNEIIMAARAHWFDDEPADEAPVTEEAADA
ESSQ
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgcgatttccgccaaccgcgccgagctgcttgcgatcgcgaactccgtcgca
tcggagaagatgatcgacaagtcgatcgtcatcgaggcgatggaagaagccatccagaag
tcggcccgcaaccgttacggtgcagagaacgacattcgtgcgaagctcgatccgcgtacc
ggcgacctgcgcctgtggcgcgtcgtcgaagtggtcgagcacgtcgaagactatttcaag
caggtcgatctcaagcaggccgaaaagctgcagaaggacgccaagatcggtgacttcatc
gtcgatccgctgccgccggtcgatctcggtcgcatcgatgcgcagtcggccaagcaggtg
atcttccagaaggtccgcgatgccgaacgcgaccgccagtacgaggaattcaaggatcgt
gcgggtgaagtcatcaccggcgtgatcaagtcggtcgaattcggccacgtgatcgtcaac
ctcggccgcgccgaaggcgtcatccgccgcgaccagcagatcccgcgcgaagcggcccgc
gtcggcgagcgcgtgcgcgcgctggtcctgcgtgtcgagcgccagaaccgcggtccgcag
atcttcctgtctcgcgcacaccccgagttcatgaagaagctcttcgcgcaggaagtgccc
gagatctacgacggcatcatcgagatcaaggcggccgcccgcgacccggggtcgcgcgcc
aagatcggcgtgatcagccacgatcactcgatcgacccggtcggcgcctgcgtcggcatg
aagggcagccgcgtccaggccgtcgtgcaggaactgcagggcgagaagatcgatatcatt
ccctggagcgaggacaccgcgactttcgtcgtcaacgcgctgcagcccgcgaccgtcagc
cgcgtcgtcatcgacgaagaagaaagccgcatcgaagtcgtcgtgcccgatgaccagctt
tcgctggcgatcggccgccgcggccagaacgtgcgcctcgcttcgcagctcaccggttcg
cagatcgacatcatgaccgaggccgaggcttcggagaagcgccagaaggaattcaccgag
cgctccaagatgttcgaggacgaactcgatgtcgacgagaccctctcgcagctgctggtt
gccgaaggcttcaccgagctggaagaagtcgcctacatcgaactgtccgagctggccgcg
atcgagggcttcgacgaggaacttgccgaagaacttcagagccgcgcccacgaagcgctc
gagcgccgcgaggaggccgcccgcgaggaacgccgcgcgctgggcgtcgaggatgccgtg
gccgagctgccgcacctcaccgaagcgatgctggtcacgctcggcaagggcgggatcaag
acgctcgacgacgttgccgacctcgccaccgacgaactcatcgccaagaagcgttccgag
cagcgtcgccgcgacggctcggtcaaccgacgcgcccgcgaagaggacaagggcggtgta
ctcggcgagtacggcctgaccgaagagcagggcaatgaaatcatcatggccgctcgcgcc
cactggttcgacgacgaaccggcggacgaagcgcctgtaaccgaggaggccgccgatgcg
gaatcctcgcaatga
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