Novosphingobium sp. PP1Y: PP1Y_AT11378
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Entry
PP1Y_AT11378 CDS
T01515
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT11378
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT11378
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Ortholog
Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
CCA92063
LinkDB
All DBs
Position
complement(1220970..1223357)
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AA seq
795 aa
AA seq
DB search
MKRKLGGYSCHGAALAAIALSLFSSEAYGQEVASGDAPQENVSAPEIIVTAQFRAQRLQD
TPIAITATTGSQLAAKNVDSVTDLTAIAPNVNLSEATGLNGSAVQAYIRGIGQSDSSFAL
EPGVGIYIDDVYYGTTFGAILDLNDLDRVEVLRGPQGTLSGKNSIGGSVKLFSRKPDEDT
DGFVEATTGSFGRIDLRGSAGFVIADGFYARVSGVSKHTDGYFDLLDYGCVFPDSGIAST
GSGGDCKVGTEGGVDVKGTRLALRYAPVGSSLEVNVVADYAHNTSDQVATKLLYADNPNT
RSYVAGDPTGGIPLDDRFLTGRHAYSSYANYAAGGNYTTVFGTNYQVEPGSFNSSPDSSA
KSWGVAGTVDYELTGDLSMKSITAYRKATGRTGIDLDGSPLSILVQEFDYEHRQFTQELR
ISGRIGTLVDFTTGAYYYDAHDRFSGRVLIPNAFFNFVQDDPVTNRSISGFLHTELHLSS
NLNLIGGLRYTDDRKTYGFSRRNVDGSLPTGEFLTDNFLIVGLDGQSGTFKGDRLDYRLG
VNYRFSPSVMAYAQVATGYKGGGINPRPYTPDQIVSFKPETLTTYEAGFKSDLFENRIRL
NGTVFYNDYRDIQINRYLCPESASTTCSQPANAGDAKTWGIEAEFFAEPVYGLTIDASTG
YLHFKYTRVDATTLVEKDFKAPFNPSWQASAGIQYAANLGENWGTITPRFDWNYQSSFYF
GSINNEYNRVAARNLFNLRVTYDSPDKSWQLSAGATNLFDKFYYTGASENVANYGVSSGT
VGRPREWFVSLRRNF
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaagttgggcggctattcttgtcatggcgcagcgctggccgcgatcgccctg
tcacttttttcgagcgaagcatacgggcaggaagtcgcatccggcgatgcgccgcaagag
aacgtctccgcgccggaaatcatcgtaaccgcgcaattccgtgcccagcgccttcaggac
acgccgatcgccatcaccgcaacgaccggttcgcaactggcggccaagaacgtcgacagc
gtcaccgacctcacggccatcgcgcccaacgtcaatctctccgaagcgacgggcctgaac
gggagtgcagtgcaggcctatattcgaggtatcggacaaagcgattccagcttcgcgctc
gaaccgggcgtaggcatctacatcgacgatgtctattacggcaccactttcggcgcgatc
ctcgacctcaatgacctcgaccgcgtcgaagtcctgcgcggaccgcaaggcactctgtcc
ggcaagaactccattggcgggtcggtcaagctgttcagccgcaagccggatgaggacacg
gacggcttcgtcgaagcgaccacgggcagtttcggccggatcgatttgagaggcagcgcc
ggcttcgtcattgccgacgggttctatgccagggtttccggcgtctccaagcataccgac
ggctatttcgatctgctcgactatggctgcgtcttcccggactccggtatcgcgtcgacc
ggttccggcggagactgcaaggtcggcacggaaggcggcgtcgacgtcaagggaacgcgc
ctggcgcttcgctatgcaccggtcggctcatcgctcgaagtgaacgtggttgcagactac
gcgcacaacacgtccgaccaggtcgccaccaaactgctctatgccgacaatcccaacacg
cgcagctacgtggcgggcgacccgacgggcggcatcccactggatgatcgcttcctgacc
ggtcgccacgcctattcgagttacgcgaattatgcagctggcggcaattacacgacggtc
ttcggaacaaactatcaggtcgagccgggcagcttcaattccagccccgacagctccgcg
aaaagctggggcgtggcgggaaccgtggactatgagttgaccggcgacctcagcatgaag
tcgattaccgcctaccggaaagcgacaggacgcaccggcatcgatctcgacggctcgccc
ctatcgatcctcgtgcaggagttcgactacgaacaccggcaattcacgcaggaactgcgc
atctcgggacggatcggcacactcgtcgacttcaccaccggagcctactactacgatgct
cacgatcgcttctcgggtcgcgtcctcattcccaatgcattctttaacttcgtgcaggac
gatccggtcaccaaccgcagcatttcaggcttcctgcacactgagttgcacctgagctcc
aacctcaacctgatcggcggcctgcgctacaccgatgaccgcaagacctacggattcagt
cgaaggaacgtcgatggttccttgccaaccggggaattcctgacggacaatttcctgatc
gttggcctcgatggccagagcggaactttcaagggtgaccgcctcgactatcgccttggc
gtgaactaccggttcagtccgtccgtaatggcctatgcgcaagtggctacgggctacaag
ggcggcggcatcaatccgcgaccctatacgcccgaccagatcgtgagcttcaagccggaa
acactgacgacctatgaagcgggattcaagtcggatcttttcgagaatcgcattcgcctg
aacggcacggtgttctacaacgattaccgggacatccagatcaatcgctatctatgcccg
gaaagcgccagcacaacctgctcgcaacccgcgaatgccggcgatgcaaagacgtggggt
atcgaagcggaattcttcgcagaacctgtctacggcctcacaatcgacgcttcgaccggc
tacctgcacttcaaatacacgcgggtcgatgcgaccacactggtcgagaaagacttcaag
gcacccttcaatccatcatggcaggcgagtgcaggcatccagtatgcggccaacctgggc
gagaattggggcacgattactccccggttcgattggaactaccagtcgtcgttctacttc
ggatcgatcaacaacgaatacaaccgcgttgccgcgcgcaacctgttcaacttgcgcgta
acctatgattccccggacaagtcctggcaattgagcgccggtgcaacaaacctgttcgac
aagttctactacaccggcgcaagcgaaaacgtggccaactacggggtcagttccggcacg
gtcgggaggccgcgtgaatggttcgtctcgcttcgaaggaacttctga
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