Novosphingobium sp. PP1Y: PP1Y_AT11504
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Entry
PP1Y_AT11504 CDS
T01515
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT11504
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT11504
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CCA92073
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Position
1232748..1235147
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AA seq
799 aa
AA seq
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MQIFTRARLRRVLLVTVSGSGLFAAAPVLAQDLPNEAEQTERAEQSPSFNEIIVTAQFRA
QNLQDTPLSITAVDANLLASRNQTDISQIAAQAPNVQLTQMGGAFGSSMAVYVRGIGQYD
FNPAYEPGVGMYVDDVYYATLTGSIMDLLDLERVEVLRGPQGTLTGRNSIGGAIKLFSVK
PSNENSGSVEVAYGSRDRTDLRGSANFVLTDNLYARIAAVHKRQDGYVDQVDFGCANPGN
PLGIGARPSTPSDCVVDKFGEKNYTGLRGSLRFNPDDKLDWTITGDYTYENRSYSASVLT
VNDTSKTDGVNFICGRFCTYADFFAPAGGIIDQAYYMPSKTKFEGWGVSSNVSYEFSSHL
KLQSITAYRRYRQVFGTDDDFTPNPNIVGAGFNDLKFRFFSQELRLSGDIGPDAEWTLGG
FYSDQKTLYFTRQDIRYIDYAFCGGMGACNLQFQGNDPVNADSKAVFGTVIVRPTAELTL
TGGLRYTKEHKDYTFVRKGLDGGVLNDSFGVGLLDGLVGLYDGDRVDWRISADYRFSPEI
MGYATVSTGFKGGGVVARPFTALQAINGAFDPETLTAYEMGVKTDFLGHRVRLNLSGFYN
DYKNIQLPISDCSVLDEVPVGTGTNTCAAIQNAGDGKMYGLEAEFFANFVDGLDIDASLS
WIDGKWKRIDEVVGGAIKIDDPITTPNWKWSAGIQYRADLGEFGSITPRFDLAYTGKRSV
GRLTLTSPLEYRPDFILANARLTWKNRDEDLSISFEVQNLFDKYYLLPLRFVAVYATAGT
GYSTVGRPREWAVTARKTF
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcaccagggcacgcttgcgtcgcgtgttgcttgtaacggtttcggggagc
gggttgttcgctgctgcgcctgtccttgcacaggacctgcccaatgaagcggagcagaca
gaacgggcggagcaatcgccctctttcaatgaaatcatcgtcaccgcacagttccgcgcg
cagaacctgcaggatacgccgctgtcgatcacggcagtcgatgcaaacctgttggcgtca
agaaaccagacggacatttcccagatcgccgctcaggcgccgaacgttcagcttacgcag
atgggcggcgccttcggttcgtcgatggcggtctatgtccgcgggatcgggcagtacgac
ttcaacccggcctacgaacctggcgtgggtatgtatgtcgatgacgtttactatgcgacg
ctgaccggttcgatcatggacctgctcgatctcgaacgtgtcgaagttctgcgggggcct
caaggtactctgaccgggcgcaactcgatcggcggcgcgatcaagctgttttcggtgaag
cccagcaacgagaacagcggctcggtagaggtcgcctacggttcgcgcgatcgcacggac
ttgcgcggcagtgccaacttcgtgctgacagacaacctctatgcccgtatcgctgccgtc
cacaagcggcaggatggctacgtcgatcaggttgacttcggctgcgccaatcccggcaac
ccgctaggcatcggtgctcgtccatctacgccttcggattgcgtcgtcgataagttcggc
gagaagaactatacgggccttcgcggttcgctccgcttcaatccggatgacaagctcgat
tggacgatcacgggcgattacacttatgaaaatcgctcctacagcgcgagcgtcctgacg
gtcaacgatacgagcaagaccgacggcgtcaatttcatctgcggacgcttctgtacatac
gcggatttcttcgcaccggcgggcggcattatcgatcaggcatattacatgcccagcaag
acgaagttcgagggctggggcgtttcgagcaacgttagctacgagttcagttcccatctg
aagttgcagtcgatcaccgcttaccggcgttatcgacaggtctttggcaccgacgacgat
ttcacgcccaatcccaacatcgttggcgctggcttcaatgacttgaagtttcgcttcttc
agccaggaactgcgcctttccggcgatatcgggcctgacgcggaatggaccctgggcggc
ttctacagcgatcagaagactctctatttcacgcggcaggatatccgctacatcgattat
gccttctgcggaggcatgggcgcttgcaacctgcagttccagggcaacgatcccgtgaat
gccgacagcaaggcggtattcggtacggtcatcgtgcgtccgactgccgagctcacactg
accggcggcttgcggtacaccaaggagcacaaggactatacattcgttcgcaagggcctg
gatgggggcgtgctgaatgacagcttcggggtcggcctcctcgatgggctcgttggcctt
tacgacggtgatcgtgtcgattggcgtatttccgccgactatcgtttcagccccgagatc
atgggttatgcgacggtgagcaccggcttcaagggcggcggcgttgttgcgcggcctttc
acggctctccaggccatcaacggtgctttcgatccggagacgctcacggcctatgaaatg
ggcgtgaagaccgacttcctcggtcatcgtgtgcgcctcaacctctccgggttctataac
gactacaagaatatccagttgccgatttcggactgttcggtactcgatgaagtgccggtg
ggaacgggtacgaatacttgcgcggcaatccagaacgcaggcgatggcaagatgtacggc
ctagaggcggagttcttcgcaaacttcgtcgatggtctcgatatcgatgcgtcgctcagc
tggatcgatggcaagtggaaacggatcgatgaggttgtgggcggagccatcaagatcgat
gatccgattaccacgcccaactggaagtggagcgcgggcattcagtatcgtgccgatctg
ggcgaattcggatcgatcacgccgcgcttcgatcttgcctataccggcaagcgcagtgtg
gggcgtctgacgctcacttctccgctggaataccggcctgatttcatcctggcgaatgcg
cggcttacctggaaaaacagggacgaggatctttccatctcgttcgaagtccagaacctt
ttcgacaagtactacctgctcccactgcggttcgtggctgtctacgccacggcggggacc
gggtacagcacggttgggcgaccgcgcgaatgggccgtgaccgcccggaagaccttttga
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