Novosphingobium sp. PP1Y: PP1Y_AT12104
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Entry
PP1Y_AT12104 CDS
T01515
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT12104
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT12104
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CCA92129
LinkDB
All DBs
Position
complement(1293073..1295418)
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AA seq
781 aa
AA seq
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MKLKRLQLVCAILAGTALSSNPVFAQSAETAQDTAQPQENTGNDIVVTAQRQSQRLLDVP
LSVQAVSGDTLRDRGITDQRQLGLIAPSLQVQRDNNYSIRGIGTQSFASTIESSVATAID
GVTLGSSILNGNPFLDVARVEVLNGPQGLLFGKNASAGLVNITTERPEIGHYGANFNAQA
TSNALPGDNADGVQVDSTINVPVTDNSALRVSGIYKYQQPITHYIRDNATGRQDNNFRQY
GLRGKYLLEATDQLTVYAIGEYYETHGIGTIFDVTYRQLADGSINEGPVAGDGVTPGDHN
FYAGSDAAQYRDLKTGGAQLNLDYELDNGWTLSNIFAWKFYSLGQQIDADSTGQNGANIN
STDSRFDQFSEELRLALPSTGPLTGQVGLYYYRSKLDQVSQIAGNNFFTDPLLGNAFCVG
PNAPSTCARTNDYFLGTDKDYTSKNESYAAFGQLTYAFNDMFNVFAGGRFTHDKVSIDLV
QNTGDYFLTLGVPDGTFKQSYSNDEFSWKFGGQFKPTNDVMFYASYGRGYKGPGMNDTGA
SLDADLAIYPETTKNFEAGVKSSLLGRMVTINASVFRTIFDNFQIQSFDTELRTFVIGNA
AKVKSKGAEAAVTIRPAYGLTLSATGAYADTKFDTYEGAQCYPGQGCGTSGTFDASGYRL
AYAPKFTGTIGAAYELPLNDNGLSLLLNADLYHRSKVETVINHAPDSQIGAIDVLNGSIG
LRGDAWNLSVFCKNCTNKVYPLAIQIESGDSSAQPTPMLSYTQRWGLDSTRTIGLRFGYN
F
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaagagactacaacttgtttgcgcaattctggccgggaccgcgctgtccagc
aatccggtgttcgcgcagagcgcggaaaccgcgcaggacacggcccagccccaggagaac
accggtaacgacatcgtcgtcaccgcgcagcgccagtcgcagcgcctgctcgacgttccc
ctcagcgtccaggccgtcagcggcgacaccctgcgcgatcgcggcatcaccgaccagcgc
cagctgggcctcatcgcgcccagcctccaggtccagcgcgacaacaactattcgatccgc
ggtatcggcacgcagtccttcgccagcacgatcgaatcgagcgtcgcaaccgcgatcgac
ggcgtcacgctcggtagcagcatcctgaatggcaacccgttcctcgacgtggcccgcgtc
gaagtcctgaacggcccgcaaggcctgctgttcggcaagaacgcttcggccggtctcgtc
aacatcaccaccgaacgtccggaaatcggccactacggtgccaacttcaacgcacaggca
acctcgaatgccctgcccggcgacaatgccgacggcgtccaggtcgattccacgatcaat
gttccggtcaccgacaattcggccctgcgcgtcagcggcatctacaagtaccagcagccg
atcacgcactacattcgcgacaatgcgaccggccggcaggacaacaacttccgccagtac
ggcctgcgcggcaagtacctgctggaagctaccgaccagctgaccgtctacgccatcggc
gaatactacgagacgcacggcatcggcacgatcttcgacgtcacctaccgccagctcgcc
gatggcagcatcaatgaaggcccggtcgcgggcgacggcgtaacgccaggcgatcacaac
ttctatgcgggaagcgacgccgcgcagtatcgcgacctcaagaccggtggtgcccagctc
aacctcgattatgaactcgacaacggctggaccctgtcgaacatcttcgcctggaagttc
tactcgctcggtcagcagatcgacgccgactcgaccggacagaacggtgcgaacatcaac
agcaccgactcgcgcttcgaccagttcagcgaagaactgcgcctggccctgccctcgacg
ggtccgcttaccggccaggtcggtctttactactatcgctcaaagctcgatcaggtcagc
cagatcgccgggaacaacttcttcacggatccgctgctgggcaacgcgttctgcgtgggg
cccaacgctccgtcgacctgtgcgcggaccaacgactacttcctgggcaccgacaaggac
tacacgagcaagaacgagagctacgctgcgttcggtcagctgacctatgccttcaacgac
atgttcaatgtctttgccggcggtcgcttcacgcatgacaaggtctcgatcgacctcgtc
cagaacacgggcgattacttcctgacgctcggcgttcccgacgggaccttcaagcagagc
tacagcaacgacgagttcagctggaagttcggcggccagttcaagcccacgaacgacgtg
atgttctatgcctcctacggccgtggctacaagggcccgggcatgaacgacaccggcgca
tccctcgatgccgacctcgccatctaccccgaaaccaccaagaacttcgaagcgggcgtc
aagtcgagcctgctgggccgcatggtcacgatcaacgcctcggtgttccggaccatcttc
gacaacttccagatccagtcgttcgataccgaattgcgcactttcgtgatcggcaacgct
gccaaggtgaagagcaagggtgccgaagccgcggtcacgatccgtcctgcatacggcctg
acgctttcggccaccggcgcctatgccgataccaaattcgacacctacgaaggcgcacag
tgctacccgggccagggctgcggtacgtccggtacgttcgacgcatcgggataccgcctt
gcctatgcacccaagttcaccgggacgatcggcgccgcttacgagctgccgctgaacgac
aacggcctgagcctgctgctgaatgccgacctctaccatcgctcgaaggtcgagacggtc
atcaatcacgcaccggattcgcagatcggtgcgatcgacgtcctgaacggcagcatcggt
cttcgcggcgacgcctggaacctgtcggtgttctgcaagaactgcacgaacaaggtctac
ccgctcgccatccagatcgaatctggcgacagcagcgctcagcccacccccatgctgagc
tatacgcagcgctggggcctggactcgaccaggactatcggcctgcgtttcggctacaat
ttctga
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