Novosphingobium sp. PP1Y: PP1Y_AT13137
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Entry
PP1Y_AT13137 CDS
T01515
Name
(GenBank) xanthine dehydrogenase YagR molybdenum-binding subunit
KO
K11177
xanthine dehydrogenase YagR molybdenum-binding subunit [EC:
1.17.1.4
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00230
Purine metabolism
npp01100
Metabolic pathways
npp01120
Microbial metabolism in diverse environments
npp01232
Nucleotide metabolism
Module
npp_M00958
Adenine ribonucleotide degradation, AMP => Urate
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PP1Y_AT13137
Enzymes [BR:
npp01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
PP1Y_AT13137
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Attacin_N
DUF3659
Motif
Other DBs
NCBI-ProteinID:
CCA92211
LinkDB
All DBs
Position
complement(1394656..1396854)
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AA seq
732 aa
AA seq
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MTVHFRQDEPDNRNLLDSFGQKIIGKPLSRPEGLAKVTGTAPYSAEYVVPGCLHGVLVTA
PFTKGRISRIDKEAALAMDGVVAVIDDERMTVRPAQGTAGKAPKQDPREIAYHGQPIALV
VAETFEQASHAAKRLRFDFEAQDPAELPLDPAAVDAKLKKGGTQTGDLAHAMATAAHSVD
LTYTTEGHASAAMEPHAAIAKWDGQKLTVYASLQMPNYNIAELADALGLDEDAIRLVARY
VGGGFGSKLGISQETLAASLAAMELQRPVRVIMTRRQVFQTIMRRSETQQRLQLAADAEG
RLTGFGHEARVSNLPAEPFAEPVLQSSAFLYGGENRLLQLEVARVHRMTAGSVRAPGEAV
GMPTLEAAMDCLAEKAGIDPVELRLRNIPDKHPTQDLPFTAHGLAECLTKGAEAFGWDHG
PRKPRHRRESEWWIGTGMASAARVHNVAEAKASVTLNPDGTATVQSDMTDIGTGTYAILA
QIAGEMLGLPGEKVLVELGDTAFPRGPGSGGSWGAASVGSAVSVACEEIRNRLAGKAGVS
PKDLKLEDGRIAGSSGRPIGDLLEGQPLSVVGHYEPGAISEDFAASSFGAFFTEVRVNRH
TGEARVSRMLGAFGIGRVLNAKTARSQCIGGMTWSIGAALTEALLFDPRNGHLVNCDLAE
YHVPVHRDVPDLEVLMLEERDPAASAIQAKGVGELAMCGGAGAIANAIYNACGARLFDFP
MTPDRVLAALPD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgttcatttccgtcaggacgaacccgacaaccgcaacctgctcgacagtttcggg
cagaagatcatcggcaaaccgctgtcgcggccggagggtctggccaaggtcaccggcacg
gcgccctattcggctgaatatgtcgtccccgggtgcctgcacggtgtgctggtcaccgca
cctttcaccaagggccgcatctcgcggatcgacaaggaggcagccctggcgatggatggc
gtcgtcgcagtcatcgacgatgagcgcatgaccgtgcgccctgcccagggcacggccgga
aaagcgccgaagcaagacccgcgagagatcgcctaccatggccagccgatcgctctcgtc
gtcgccgagactttcgaacaggcgagccacgcggcaaagcgcctgcggttcgacttcgag
gcgcaggacccagccgagttgccgctcgatcccgccgcagtcgacgccaaactaaagaaa
ggtgggacacagacaggcgatctcgcacacgccatggccacggctgcgcacagcgtcgac
ctgacatacacgaccgagggccacgccagcgctgccatggaaccgcacgccgccatcgcc
aaatgggacggccagaagctgacggtttatgcctccctgcaaatgcccaattacaacatc
gccgaactcgccgatgcgctgggactggatgaggacgccatccgccttgtggcgcgttac
gtgggcgggggcttcggctcaaagcttggcatcagtcaggaaaccctggccgcctcgctt
gcggcgatggaactgcagcggccggtccgggttatcatgacccgcaggcaggtgttccag
acaatcatgcgccgctccgagacgcagcaacgcctgcaactggctgccgatgctgaaggc
aggctgacaggcttcggtcacgaggcgcgcgtttccaaccttcccgcagaaccctttgcc
gaaccggtgctgcagtccagcgcctttctctatggcggcgaaaaccgtctgctccagctc
gaagtcgcgcgcgtccatcgcatgaccgccggatcggttcgcgcgccgggcgaggcggtc
ggcatgccgacgctcgaagcggccatggattgccttgccgaaaaggcggggatcgaccct
gtggaactgcgtcttcgcaacataccggacaagcacccaacccaagaccttccgttcacc
gcccacggcctcgccgagtgtctcacgaaaggtgcagaagccttcgggtgggaccatgga
ccgcgcaagccccgtcatcggcgggagagcgaatggtggatcggcaccggcatggccagt
gcagcgcgggtccacaatgtcgccgaggccaaggcaagcgtcacgctcaatcccgacggc
actgccacggtccagagcgatatgaccgacatcggcaccggcacttacgccatccttgcc
caaatcgcgggagaaatgctgggtctgcccggcgagaaggtgctcgtcgaactgggcgac
actgcctttccccgcggtcccgggtcgggcggaagctggggcgccgcctcggtaggatcg
gcggtgtcggttgcctgcgaggagatccgcaaccggcttgccggaaaggcaggcgtttcg
ccgaaggatctgaagctggaggacggaaggatcgcaggaagttccggccgaccgatcggc
gatctgcttgaggggcagccgctttcggtagtcggtcattacgagccaggcgcgatctcc
gaagacttcgcggcatcaagtttcggcgcgttcttcaccgaagtgcgcgtcaatcgacat
accggcgaagcgagagtctcacgaatgctgggagccttcggcatcggccgcgtgctgaac
gccaagaccgcgcgctcccagtgcatcggcggcatgacctggagtatcggcgccgctctg
accgaggcgctgctgttcgacccgcgcaacggccacctcgtcaattgcgacctcgccgaa
tatcatgtgcccgtccaccgcgacgttcccgacctcgaggtgctgatgctggaggagcgc
gatcccgccgccagcgccatccaggcaaaaggcgtgggcgaactggccatgtgcggggga
gccggcgcgattgccaacgcaatttacaacgcctgcggcgcacgcctgttcgactttccg
atgacccccgacagggtactggcggcgctgcccgattga
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