Novosphingobium sp. PP1Y: PP1Y_AT13355
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Entry
PP1Y_AT13355 CDS
T01515
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT13355
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT13355
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CCA92230
LinkDB
All DBs
Position
complement(1417064..1419508)
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AA seq
814 aa
AA seq
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MQFPKSILLASTAFAAVSIAGPALAQDTTGSEEATRNTGLSEIVVTARKRVESAQDIPVV
VTAISAQTLEQRDITSIEKIAAATPSLTVGHASNGSAAQVTLRGIGSSSTSIGIEQSVAT
VVDGVYYGQGRILEEGFFDLAGVEVLKGPQVLFFGKNATAGVISIKTADPTPEWEFKARA
SYEFKAQEAELEGVASGPLADDLGIRVAVRGSKAWGGYYKNVSRDYDLALLPFTSTPTSS
DQPGNRQFLGRVTLKYEPTSEITNTLKVSYNYNKANNSSYNYVAYNCPTGFTALSGDACG
LNFQTHQNDMPAEEATNFPYAGDGSLYNKYRSAAITNTFNYELGTVTLTNVTNYNWNNNR
WLCACEFQANPLSVWATENSSWKAFSNEARALTHFDGPLNVMVGLLYQKTKRDFEQFVSF
SLSDIPAAGRFQYIDAYKTSYTKGETISGFGQVTWKLTDNLELDGGVRYTHETKKSAFTQ
PYVSPAFTGAWVQGRTTLGDQTFTNWSPEVSLTYKPIQDVMFYASYKTGYKSGGFSNGGI
DSAFGNPAVDLLFDPETAKGFEAGVKSTILDNQLRLNLGAYSYKYKNLQIDFFNSSIIAF
QTLTADARTKGVELDFEFAPYAVPGLNVHGSLNYNDAKYDSFPDAPCYAGQTPDEGCNLT
ADGAGGYRVLTAAEITGGTPGVRQNLNGMVLGMAPHWTGSLGVNYDTPVGGGLKAGVGGN
MRYSSSYLVQGFGVPHSRNSSYATLDAGLRLGAEDDSWQLAVIGKNLTNKQYINGGVDGP
NTGSGTGTPGGVHADQLGFGAEPRTVTVQVTTRF
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgcaattccccaagtccattctgcttgcgtcaacggcatttgccgccgtgtccattgcc
gggcccgccctggcccaggatacgaccggcagcgaagaggcgaccaggaacaccggcctg
agcgaaatcgtcgtgaccgcccgtaagcgcgttgaaagtgcgcaggacattcctgtcgtc
gtcactgcgatctcggcccagacgctcgagcagcgcgacatcaccagcatcgaaaagatc
gcagccgctacgccgagcctgaccgtcggccacgcctcgaacggctcggccgcgcaagtc
acgctgcgcggaattggctcgtcttcgacctcgatcggcatcgaacaatcggtcgccacg
gtcgtcgacggcgtttattacggccagggccgcattctggaggaaggcttcttcgacctt
gccggcgtcgaagtgctcaagggcccgcaggtcctgttcttcggcaagaacgccactgcc
ggcgttatctcgatcaagacggccgatcccacccccgaatgggaattcaaggcccgcgcc
agctacgaattcaaggctcaggaagccgagctcgaaggcgtcgcctccggcccgctggcc
gacgatctgggtattcgcgtcgccgtacgcggcagcaaggcctggggcgggtattacaag
aacgtctcgcgcgactatgaccttgcgctgctgccgttcacctcgaccccgaccagttcg
gaccagccgggcaaccgccagttcctgggccgcgttacgctgaagtacgaaccgaccagc
gaaatcaccaatacgctcaaggtctcgtacaactacaacaaggcgaacaactcgagctac
aactacgtcgcctataactgcccgaccggcttcaccgcgctgtcgggcgatgcctgcggc
ctgaacttccagacccatcagaacgacatgccggcagaggaagcgaccaacttcccctat
gcgggcgacggcagcctctacaacaagtaccgttccgcagcgatcaccaacacgttcaac
tacgagcttggcacggtcacgctgacaaacgtcaccaattacaactggaacaacaaccgc
tggctgtgcgcctgcgaattccaggccaatccgctctccgtgtgggccaccgaaaactcg
agctggaaggccttctctaacgaagcgcgcgcacttacgcacttcgacggtccgctcaac
gtgatggtcggcctgctttaccagaagaccaagcgcgacttcgaacagttcgtcagcttc
agcctctcggacattccggccgcgggcaggttccagtacatcgacgcctacaagaccagc
tacaccaagggtgagacgatctcgggcttcggccaggtaacctggaagctgaccgacaat
ctcgaactcgacggcggcgtgcgctacacccacgagaccaagaagagcgccttcacccag
ccttacgtcagccccgccttcactggcgcttgggtacagggccgcacgacgctgggcgac
cagaccttcaccaactggtccccggaagtctcgctgacctacaagccgattcaggacgtc
atgttctatgcgtcgtacaagaccggctacaagtcgggcggcttctcgaacggcggcatc
gactccgccttcggcaatccggcggtcgacctgctgttcgatccggagacggcaaagggc
ttcgaagcaggtgtgaagtccaccatcctcgacaaccagctgcgcctgaacctgggtgcc
tacagctacaagtacaagaacctgcagatcgacttcttcaactcgtcgatcatcgcgttc
cagaccctgaccgccgacgcgcgaaccaagggcgtagagctcgatttcgaatttgcgcct
tacgcggttccgggcctgaacgtgcacggcagcctcaactacaacgacgccaagtacgac
agcttccccgacgccccctgctatgcgggccagacgccggacgagggctgtaacctcacc
gctgacggtgcaggcggctatcgcgtcctcacggcggccgagatcacgggcggcacgcca
ggcgtccgccagaacctgaatggcatggtgctgggcatggccccgcactggaccggttcg
ctgggcgtcaactacgacaccccggtgggcggcggcttgaaggcaggcgttggcggcaac
atgcgctacagctcctcctacctggtccagggcttcggcgtcccccattcgcgcaacagc
tcctatgccacgctcgatgccggccttcgcttgggcgcagaggatgacagctggcaactg
gcggtcatcggcaagaacctgaccaacaagcagtacatcaacggcggcgtcgacggtccg
aacaccggttcgggcactggcacgcccggcggcgtgcatgccgaccagctcggcttcggt
gccgaaccgcgcacggtcaccgtccaggtcaccacgcgcttctga
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