Novosphingobium sp. PP1Y: PP1Y_AT13560
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Entry
PP1Y_AT13560 CDS
T01515
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT13560
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT13560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CNV-Replicase_N
Motif
Other DBs
NCBI-ProteinID:
CCA92248
LinkDB
All DBs
Position
1438942..1441146
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AA seq
734 aa
AA seq
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MKRALSYLLLGTCCAAIVQAPAYAQQSEESTGGLKEIVVTAQKQAQSQQDVPISVTAVTG
ESLAAAQVNNVADLSNSIPNVQINTFSNSPDSAVFTIRGVGVNDADPYVGTTVSVVVDGV
VVGVNTAALLSLFDIDRVEVLRGPQGTLFGANTTGGVINVVTKQPTGELGGEFEAVYGNY
NHVELNAALNFPITDNLSGKISVLHNSMDGYFRNYADNRRIGERNITSLRGYLKYAQGNY
DATVIGEYVRSRNGSQTGILLAGPGELFYVPGETEKAFDFKRGLSYDQPDANDRDSYSIT
LTQNLSTGIGDWTSITSYRDYDNDLYSDDDATTLVLLQTHRRIKHHQFSQELRDLVDITD
STRLIVGGYYFRQHYTLDQQGKLDGFLPGLGQPQTQEQTNWSISGFAQLYQDITPDLRLQ
AGIRYSHEKTDAVSTTANTINPDGVATFDDPLIPGSLIVASGKKAWNNVGWKVGLDYKVT
PDVMLYSYYARGFKSGGFTGRIVLAEDIGPFDPEKLDTIEAGFKADLLDRHLRVNLAAFY
NFYKNMQVVQNITYPSGANSASIANAGKAETKGFELEITAAPVNGLTLTGALAYLDAKYK
EYDTQILDPATGGLVPASYAGNSLMNSPKWNASFGANWQMALGNGTLTANGLYSYTSSKF
TSYTNLPVERVGPVELVNASLNWGPDDAGWKIGIYGRNLFDEKYFNQKLSLAGIGTLASL
GAPREYGATFRYSF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggcactatcgtatctgttgctggggacctgttgcgccgccatcgtgcaggcg
ccggcctatgcgcagcagagtgaggaatccaccggcggactcaaagagatcgtcgttacc
gcccagaagcaggcgcagagccagcaggatgttccgatttcggtgaccgctgtcactggc
gaaagtcttgccgcagcgcaggtcaacaatgtcgctgacttgtccaactccattccgaac
gtgcagatcaacacgttctccaactcgccggattcggccgttttcaccattcgcggcgtc
ggtgtcaacgatgccgacccctatgtcggcacgacggtttcggtggtcgtcgacggtgtc
gtcgtcggcgtcaacaccgcagcgctgctttcgctgttcgacatcgaccgggtcgaggtg
ctgcgcggaccgcagggcaccctgttcggcgccaatacgacaggcggcgtcatcaacgtc
gtgaccaagcagccgaccggcgaactgggcggcgaattcgaagcggtttacggcaactac
aaccatgtcgagctcaatgccgcgctgaacttcccgatcaccgacaacctttcggggaag
atcagcgtcctgcacaattcgatggacggctacttccgcaactacgcggacaatcgccgc
atcggcgagcgcaacatcacctcgctgcgcggttacctcaagtacgcccagggcaactac
gatgcgaccgtgatcggcgaatatgtgcgcagccgcaacggttcgcagacgggcatcctg
ctcgccggcccgggcgaactgttctacgttcccggcgagaccgaaaaggccttcgatttc
aagcgcggtctcagctacgatcaacccgacgcgaacgatcgcgattcctattcgataacg
ctgacgcagaacctgtcgaccggcatcggcgactggacctcgatcaccagctatcgcgac
tatgacaacgacctctattcggacgacgatgcgaccacgctggtgcttctgcagacgcac
cgccggatcaagcatcaccagttcagccaggaactgcgcgacctggtcgacatcaccgac
agcacccgcctgatcgtcggcggctactacttccgccagcactacacgctggaccagcag
ggcaagctcgacggcttcctgccgggtctcggccagccgcagacgcaggagcagaccaac
tggtcgatctccggcttcgcgcagctttaccaggacataacgcccgacctgcgcctgcag
gccggcattcgctatagccatgaaaagaccgacgcggtttccacgacggccaacaccatc
aatccggacggggtcgcgactttcgacgatcctctgatcccgggctcgctgatcgtcgcg
agtggcaagaaggcatggaacaacgtcggctggaaggtcgggctcgactacaaggtcacg
cctgacgtcatgttgtacagctactatgcgcgcggcttcaagtcgggcggctttaccggg
cgcatcgtcttggccgaggacatcggtccgttcgatcccgaaaagctcgacactatcgaa
gccgggttcaaggcagacctgctcgaccgccacctgcgcgtgaacctcgccgcattctac
aatttctacaagaacatgcaggtggtgcagaacatcacctatccctcaggcgcgaactcg
gcatcgatcgccaatgcgggcaaggctgaaacgaagggcttcgaactggagatcaccgcc
gcgccggtgaatgggctgaccctgaccggcgcgctggcctacctcgatgccaagtacaag
gaatacgacacccagatcctggacccggcaacgggcggcctggttccggcttcctatgcc
ggaaacagcctcatgaactcgccgaagtggaacgcctcgttcggcgccaactggcagatg
gcgcttggaaatggtacactgaccgcgaacggactgtacagctacaccagctccaagttc
accagctatacgaaccttccggtggaacgtgtcgggccggtagagctggtcaatgccagc
ctgaactgggggcctgacgatgccggctggaagatcggcatttacggccgcaacctgttc
gacgagaagtatttcaaccagaagctgagcctggccggcatcggtacgttggcctcgctc
ggggcgccgcgcgaatacggcgcgaccttccgctacagcttctga
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