Novosphingobium sp. PP1Y: PP1Y_AT14056
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Entry
PP1Y_AT14056 CDS
T01515
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npp03032
]
PP1Y_AT14056
03036 Chromosome and associated proteins [BR:
npp03036
]
PP1Y_AT14056
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT14056
DNA replication proteins [BR:
npp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PP1Y_AT14056
Chromosome and associated proteins [BR:
npp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PP1Y_AT14056
DNA repair and recombination proteins [BR:
npp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PP1Y_AT14056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
GTP_EFTU_D2
Motif
Other DBs
NCBI-ProteinID:
CCA92303
UniProt:
F6ILK1
LinkDB
All DBs
Position
1493210..1493482
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AA seq
90 aa
AA seq
DB search
MNKNDLISAVADTSGLTRSDATKAVEGVFDAITGALKKGDEVRLVGFGTFSVAKRKASTG
RNPRTGEPMEIKASAQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgatctcatcagcgcagttgccgacaccagcggtctgacccgcagcgat
gcgaccaaggccgtcgaaggcgttttcgacgccatcaccggcgcgctgaagaagggtgac
gaggtccgcctggttggtttcggcaccttctcggttgccaagcgcaaggcctcgaccggc
cgcaacccgcgcaccggcgagcccatggaaatcaaggcttcggctcagccgaagttcaag
gctggcaagggcctcaaggacgccgtcaactaa
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