Novosphingobium sp. PP1Y: PP1Y_AT15528
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Entry
PP1Y_AT15528 CDS
T01515
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT15528
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT15528
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
CCA92433
LinkDB
All DBs
Position
complement(1638877..1641357)
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AA seq
826 aa
AA seq
DB search
MSVIYRTSNRKRRLLAGSSLALACLAIAPTNAFAQDAAAGDAAQEAQSQGGLDEILVTAR
KREENAQETPVAITAMSGAMIEDRQIANVAQVASYAPNVNIQPVGNISGSSASLTAFIRG
VGQTDFNITVDPGVGIYVDGVYVARSVGGLLDMADISNVQILRGPQGTLFGKNTIGGAII
VNTNQPSNDFELKLEAATGSFNRADIKGLINVPISDTLAMRAVASYETRDGYQRRLFDGG
RQGNKDSFSGRVAFKWTPTDAFTAILAGDVNIRREEQTAIYLIENRDSPDLLQIVTTPFG
TVAFPSSNFAFNKLGLGAGQCGLPGELAPVSNPNCVSSRWVTGDIDTTWAGGPNRSDFDL
WGVNLTMEYDFGDISLKSISAYRDQKSVIEYDFDGTPHEVLQLTNNVDVWQASQELQLNG
SVFDDTLKFALGAYYLKEKGGDIEPLRFGFANFFSGGLIDNDSYAGYLQFTYKVTDKLSI
TPGIRYTDETKRFDPSAQVITRDYTAGLLPPYPDGVFIQYSRCLVGQATPQLIPSGPLAG
FPDPACVATATNPGGNHTLPAVQVSAKAKEWTPAVSVNYQFTDDVMGYVSYSKGFKNGGF
SQRIFPAELATPAFSPEFVTSYEVGLKTELFDRRLRMNLALFQSDYSDIQIVVNEGIAPK
VRNGGEGRIKGFEIEGQAAPTDWLRIDYGVGYLDAFYRSVDPTAFPVNTNSKFAFVPKWT
ATVAANATVFDGDKGKLVLRGDWYHQSGTFKDAVNSPQLFQPAYSVFGASASYTDPSDHF
TLTAGVTNIGDERYLQGGYVDLNVGGAATASYSRPREWFLKLAYKY
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgatttaccgcacgagcaaccgcaagcggcggctgctagccggcagcagcctt
gcgcttgcctgccttgccatagcgccgaccaatgcctttgcgcaggacgccgcagcaggc
gatgccgcacaggaagcccaaagccagggcggactcgacgagattctcgtcaccgcgcgc
aagcgtgaggaaaatgcccaggaaaccccggtggccatcaccgcgatgagcggggccatg
atcgaggaccgccagattgccaacgtggcgcaggtcgcgtcctatgcacctaacgtcaac
attcagccagtcggcaacatttcgggctcaagcgcctcgctcaccgcattcatccgcggc
gtcggccagaccgatttcaacatcaccgtcgatccgggcgtcggcatctatgtcgatggc
gtctacgtggcgcgctcggtgggcgggctgctcgacatggctgacatcagcaacgtgcag
atcctgcgcggtccgcagggcacgctgttcggcaagaacaccatcggcggcgcgatcatc
gtcaacaccaaccagccgagcaacgatttcgagctcaagctcgaagccgcgaccggcagc
ttcaatcgcgccgatatcaagggcctgatcaacgttccgattagcgacacgctggcgatg
cgagccgtggcttcctacgaaacccgcgatggctaccagcggcgcctgttcgacggcggg
cgtcagggcaacaaggacagcttctcgggccgagtggcgttcaagtggacgccgaccgac
gccttcaccgcgattctcgctggcgacgtcaacattcgacgggaagagcagacagccatc
tacctgatcgagaaccgcgattcgcccgatctgttgcagatcgtcaccacaccgttcggc
actgtggccttccccagttccaatttcgctttcaacaagctcggcctgggcgctggacag
tgcggacttccgggcgaactggccccggtcagcaatcccaattgcgtatcctcgcgctgg
gtgaccggagatatcgacacgacctgggccggcggcccgaaccgttcggacttcgacctc
tggggcgtcaacctgaccatggaatacgatttcggcgatatttcgctcaaatcgatcagc
gcctatcgcgaccagaagtcggtcatcgaatacgacttcgacggcaccccgcacgaagtc
ctgcagctgacaaacaatgtcgacgtgtggcaggcatcgcaggaattgcagctgaacggc
agcgtgttcgacgacacgctcaagttcgcgcttggcgcctattatctgaaggaaaaaggt
ggcgacatcgagccgctgcgcttcgggttcgccaacttcttcagcggcggcctgatcgat
aacgacagctatgctggctatctccagttcacctacaaggtcactgacaagctttcgatc
acgccgggcatccgctacaccgatgagaccaaacggtttgatccttcggcccaggtcatc
actcgggactacaccgcagggctgcttccgccctatcccgatggcgtgttcatccagtat
agccgttgcctcgtaggccaagcaacgccgcagcttatcccgagcggccctcttgccggc
ttccccgatccagcctgcgtggcaacagcaaccaatccgggtgggaaccacactctccct
gcggtccaggtttcggcaaaggccaaggaatggaccccggcggtctcggtgaactatcag
ttcaccgatgatgtcatgggttatgtgtcctactcgaaaggctttaagaacggtggcttc
agccagcgaatcttccctgccgaactagcgacaccggccttctctccggagttcgtcaca
tcgtatgaagtcggcctgaagaccgagctgtttgaccggcgcttgcgtatgaaccttgcg
ttgttccagtccgattacagcgacatccagatcgtggtcaacgaagggattgcacccaag
gtccgcaacggtggcgaggggcggatcaagggcttcgaaatcgaaggccaggccgcaccg
accgactggctgcggatcgactatggtgtcggctatctggatgccttctatcgctccgtc
gatcccactgctttccccgtcaacacgaactccaagttcgcgttcgttccgaaatggacc
gcgacggtcgcggcaaacgccaccgtgttcgatggcgacaagggcaagctggtcctgcgc
ggtgactggtatcaccagagcggcaccttcaaggatgccgtgaacagcccgcagctgttc
caaccggcctacagcgtgttcggcgccagcgcttcctacaccgatcccagcgatcacttc
acgctgaccgccggcgtcaccaacatcggcgacgagcgctaccttcagggcggctatgtc
gatctgaatgtcggcggcgctgccacggcaagctattcgcgtccgcgcgaatggttcctc
aagctggcgtacaagtactaa
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