Novosphingobium sp. PP1Y: PP1Y_AT18880
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Entry
PP1Y_AT18880 CDS
T01515
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PP1Y_AT18880
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
npp01007
]
PP1Y_AT18880
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npp03016
]
PP1Y_AT18880
Enzymes [BR:
npp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
PP1Y_AT18880
Amino acid related enzymes [BR:
npp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PP1Y_AT18880
Transfer RNA biogenesis [BR:
npp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PP1Y_AT18880
Prokaryotic type
PP1Y_AT18880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1b
tRNA-synt_1_2
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
CCA92766
UniProt:
F6IMW4
LinkDB
All DBs
Position
complement(1997127..1999832)
Genome browser
AA seq
901 aa
AA seq
DB search
MTDQNPAPALDKTFDPAPIEAKWYSHWEDNGLFRPERPDAQPFTIVNPPPNVTGSLHIGH
ALDNTLQDIVIRYERLRGKDALWVVGTDHAGIATQMVVERQMEAKQDKRTNYSREAFVDK
VWEWKHESGGTITRQLRRLGCSMDWSREQFTMDPHFTRAVVKVFVDLYNQGLIYRDKRLV
NWDPKLKTAISDLEVETREMQGGFWHFKYPLADGVTLANGQDYIEVATTRPETMLADMAV
AVHPEDERYEAVIGKEILQPITGRRFKVVGDEHADPQLGSGAVKITPGHDFNDFEVGKRA
GIKPADMLNMFDAEANVVQTADGLIPEKYLGMERFAARDAVVAEMKELGFLIPHVTRDKE
GNEVLHDAEPRTIQTPFGDRGGVVIEPWLTDQWYVDAETLAQPPLEAVRSGKIEIVPKTW
EKTFFNWMENIQPWCVSRQLWWGHRIPAWYAEDGEVYVAETEEEAQALAGNKKLTRDEDV
LDTWFSSALWPFATLGWPDEDAPLLKKHYPNDLLVSGFDILFFWDARMAMQGIHFMKEVP
WKRLYLHGLVRAADGQKMSKSKGNVVDPLGLIDKYGADALRFFMSAMESQGRDVKMDEKR
VEGYRNFATKLWNAARFCQSNGIGASTSVEAPAATTAVNKWIIGEVVETLAELDKAMAEL
RFDAAANTIYHFVWDQFCDWYIELVKGNFDAETKAVAGWVLDQILVMLHPFMPFVTEELW
SKMGERGDYPLITAKWPAPNAAIDGAAKAEVEWLIALIGNLRGAKAELGIAPGARLTAYL
ADPSEATRAIVERNGAAIDRLARLDAIHFEAAPAGALLQVGAGDAMLAIPLEGVIDIAAE
KARLEKALAASQKEAKSLEGRLSNPKFVEKAKPEAVEKARSDHAHHTAEAERLAAALARL
G
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccagaatcccgcgcctgcgctcgacaagactttcgaccccgccccgatcgag
gcgaagtggtattcccactgggaagacaacggcctgttccgcccggagcgcccggacgcg
cagccgttcaccatcgtcaatccgccgccgaacgtcaccggctcgctgcacatcggccac
gcgctcgacaacacgctgcaggacatcgtcatccgctacgagcgcctgcgcggcaaggac
gcgctgtgggtggtgggcaccgatcacgccggcatcgccacgcagatggtggtcgagcgc
cagatggaagcgaaacaggacaagcgcaccaactattcgcgcgaagccttcgtcgacaag
gtctgggaatggaagcacgaaagcggcggcaccatcacccgccagctgcgccgcctgggc
tgctcgatggactggagccgcgagcagttcacgatggacccgcacttcaccagggcggtc
gtgaaggtcttcgtcgatctctacaaccagggcctgatctaccgcgacaagcggctggtg
aactgggaccccaagctcaagaccgcgatctccgatctcgaggtcgagacgcgcgagatg
cagggcggtttctggcacttcaagtacccgctggccgacggcgtgacgcttgccaacggg
caggactacatcgaggtcgccaccacgcgcccggaaacgatgctggccgacatggccgtg
gctgtccatcccgaggacgagcgctacgaggccgtcatcggcaaggagatcctccagccg
atcaccgggcgccgcttcaaggtggtgggcgacgagcacgccgatccgcagctgggctcg
ggcgcggtgaagatcacgccgggccatgacttcaacgacttcgaagtcggcaagcgcgcc
ggaatcaagcctgcggacatgctcaacatgttcgatgccgaagccaacgtggtgcagacc
gcggatggcctgattcccgaaaagtaccttggcatggagcgcttcgctgcgcgcgatgcc
gtggtggccgagatgaaggaactgggcttcctcatcccccacgtcaccagggacaaggaa
ggcaacgaagtccttcacgacgccgagccgcgcacgatccagacccccttcggcgaccgc
ggcggcgtggtcatcgaaccctggctgaccgaccagtggtacgtcgatgccgaaaccctg
gcccagcccccgctcgaggcagtgcgctcgggcaagatcgagatcgtccccaagacctgg
gaaaagaccttcttcaactggatggagaacatccagccgtggtgcgtcagccgccagctc
tggtggggccaccggattccggcgtggtatgccgaggacggcgaagtctatgtcgccgag
accgaggaagaagcgcaggcgctggccggcaacaagaagctgacccgcgacgaggacgtc
ctcgacacgtggttctcgtcggcactgtggcctttcgccacgctgggctggccggacgag
gacgcgccgctgctcaagaagcactaccccaacgacctgctcgtttccggcttcgacatc
ctgttcttctgggatgcgcgcatggcgatgcagggcatccacttcatgaaggaagtgccg
tggaagcggctctacctgcatggcctcgtgcgcgcggcggacgggcagaagatgtcaaag
tccaagggcaacgtcgtcgacccgctcggcctgatcgacaagtacggcgccgacgcgctg
cgcttcttcatgtcggccatggaaagccagggccgcgacgtgaagatggatgaaaaacgc
gtcgagggttaccgcaacttcgcgaccaagctgtggaacgcggcccgcttctgccagagc
aacggcatcggcgcctcgacctcggtagaggccccggcggccacgacggcagtcaacaag
tggatcatcggcgaagtcgtcgagaccctggccgaactcgacaaggccatggccgagctg
cgcttcgacgcggcggcgaacaccatctaccacttcgtctgggaccagttctgcgactgg
tacatcgaactggtgaagggcaacttcgacgcggagaccaaggccgtcgccggttgggtg
ctcgaccagatactcgtcatgcttcaccccttcatgcccttcgtgaccgaggagctgtgg
agcaagatgggcgagcgcggcgattacccgctgatcaccgcgaagtggcccgccccgaac
gccgcgatcgacggcgccgccaaggccgaagtcgagtggctgatcgcgctgatcggcaac
ctgcgcggcgccaaggccgaactcggcattgcgccgggcgcacgcctgaccgcctacctt
gccgatccgagcgaagcgacaagggccatcgtcgagcgcaacggcgcggcgatcgaccgc
cttgcccgcctcgatgcgatccacttcgaagcggccccggcaggcgcactgctgcaagtc
ggcgccggcgatgcgatgctggcgatcccgctggaaggcgtgatcgacatcgcggcggaa
aaggcccgcctcgaaaaggcgctggccgcctcgcagaaggaagccaagtcgctggaaggc
cgcctctcgaaccccaagttcgtcgaaaaggccaagcccgaggcggtcgagaaggcccgc
agcgaccacgcgcaccacaccgccgaagccgagcgccttgcggcggcactggcgcgcctg
gggtaa
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