Novosphingobium sp. PP1Y: PP1Y_AT20390
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Entry
PP1Y_AT20390 CDS
T01515
Name
(GenBank) malate synthase
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00620
Pyruvate metabolism
npp00630
Glyoxylate and dicarboxylate metabolism
npp01100
Metabolic pathways
npp01110
Biosynthesis of secondary metabolites
npp01120
Microbial metabolism in diverse environments
npp01200
Carbon metabolism
Module
npp_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
PP1Y_AT20390
00630 Glyoxylate and dicarboxylate metabolism
PP1Y_AT20390
Enzymes [BR:
npp01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
PP1Y_AT20390
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Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
MSG_insertion
Motif
Other DBs
NCBI-ProteinID:
CCA92916
UniProt:
F6INB4
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Position
2162331..2164445
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AA seq
704 aa
AA seq
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MTQRVERSGLQIDAGLAAFVEEKVLAPIGQDTDAFWSGFAQLLARFAPRNRELLEKRDHL
QSQIDAWHMSRAGRPIEQGEYQAFLQDIGYLVPEPEVFSIGTRNVDPEIATMAGPQLVVP
VLNARFLLNAANARWGSLYDAFYGTDALDAAPAQGKGYDPVRGAAVIAEGRKFLDKALPL
ASGSWADVDSLEVTLVDPDQCVGETRKGCLFKSNGLHIEIVVDPSSQVGATDKAGISDIV
LEAALTTIVDLEDSVAAVDAEDKLLAYSNWLGVIRGDLTDTFEKGGQTLTRELAGNKVVT
VPTGEAQELPGRSLLFVRNVGHLMTNPAILLPDGSEIPEGIMDAVITSAISAQDVKGMTR
YGNSRKGSIYIVKPKMHGPEECSFTNDLFDAVEDLLQLPRNTVKVGVMDEERRTSANLAA
CIHAVKDRIVFINTGFLDRTGDEIHTSMRAGPMIRKSAIKGSTWIAAYEKRNVAIGLRHG
LSGVAQIGKGMWAAPDMMRDMMEQKVGHPRTGANTAWVPSPTAATLHAMHYHEVDVFGLR
EGIAAEEIPGLDLLLQIPLADGANWSEDEVREELENNAQGLLGYVVRWIDQGVGCSKVPD
INDVGLMEDRATLRISSQHMANWLLHGVCTEAQVMDALKRMAEKVDAQNAGDPLYAPMAG
NWDTSLAFKAACDLVFKGVEQPSGYTEPLLHAWRLKKKSALVTA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaagggttgaacgttcgggcctccagatcgacgccggattggcggctttcgtc
gaggagaaggtccttgcgcccatcgggcaggatacggatgcgttctggagcggctttgcg
cagctgttggctcgctttgctccacgcaatcgggaactgctggaaaagcgcgaccacctg
cagtcgcagatcgatgcctggcacatgtcgcgcgcgggcaggccgatcgagcagggcgaa
tatcaggcgttcctgcaggacatcggctacctcgtgcccgagccggaagtcttctcgatc
ggaacccggaacgtcgatcccgagatcgcgacgatggccgggccccagctcgtcgtgccc
gtgctcaacgcccgcttcctgctcaacgccgccaatgcgcgctggggcagcctctacgat
gcgttctacggcaccgatgcgctcgacgccgcgccggcgcagggcaagggctacgacccg
gttcgcggcgccgccgtcatcgccgagggacgcaagttcctagacaaggcgctgccgctg
gcatcgggaagctgggccgacgtcgacagcctggaagtcaccctggtcgatccggaccag
tgcgtcggcgagacccgcaagggctgcctgttcaagtccaacggcctgcacatcgagatc
gtcgtcgatccctcgagccaggtcggcgcgactgacaaggccggcatttccgacatcgtt
ctcgaagcggcgttgaccaccattgtcgaccttgaagattcggtcgcggccgtcgacgcc
gaggacaagctccttgcctattcgaactggctcggcgtgatccgcggcgacctgaccgac
actttcgagaagggcggccagaccctgacgcgcgagctggcgggtaacaaggtcgtgacc
gtccccaccggcgaggcgcaggaacttcccggccgcagcctgctgttcgtgcgcaacgtc
ggccatctgatgaccaaccctgcgattctcctgcccgatggcagcgagatccccgaaggc
atcatggacgcggtaatcaccagcgcgatttcggcgcaggacgtcaaaggcatgacccgc
tacggcaacagccgcaagggcagcatctatatcgtcaagccgaagatgcacggtcctgaa
gagtgctcctttaccaatgacttgttcgacgcagttgaggatttgctccagctgccgcgc
aacaccgtcaaggtgggcgtcatggacgaggagcgccgcacttcggccaacctcgccgcc
tgcatccacgcggtgaaggaccgcatcgtcttcatcaacaccggcttcctcgaccgcacc
ggcgatgagatccacacctcgatgcgggccggtccgatgatccgcaagagcgccatcaag
ggctcgacctggatcgccgcctacgagaagcgcaacgtcgccatcggcctcaggcacggt
ctttcgggcgtcgcccagatcggcaagggcatgtgggctgcgcccgacatgatgcgcgac
atgatggagcagaaggtcggccatcccaggaccggtgcgaacaccgcatgggtcccgtcg
cccaccgccgcgacgctccatgcgatgcactatcacgaagtcgatgtgttcggcctgcgt
gaaggtatcgccgcagaggaaatcccgggcctcgacctgctgctgcagattccgctggcc
gatggcgccaactggtccgaggacgaagtgcgcgaggaactggagaacaacgcacaaggg
ttgctcggctacgtcgtgcgctggatcgatcagggcgtcggctgctccaaggttcccgac
atcaatgacgtgggcctgatggaggaccgcgccaccttgcgcatttccagccagcacatg
gccaactggctgcttcacggcgtgtgcaccgaggcgcaggtcatggacgcgctgaagcgg
atggctgaaaaggtcgatgcccagaacgccggcgatccgctctatgcaccgatggcgggc
aactgggacaccagccttgccttcaaggcagcctgcgatctcgtcttcaagggtgtcgag
cagcccagcggctataccgaaccgctgctgcatgcctggcgcctgaagaagaaatcggct
ctggtgactgcctag
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