Novosphingobium sp. PP1Y: PP1Y_AT20788
Help
Entry
PP1Y_AT20788 CDS
T01515
Name
(GenBank) alpha amylase, catalytic region
Organism
npp
Novosphingobium sp. PP1Y
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
Motif
Other DBs
NCBI-ProteinID:
CCA92952
UniProt:
F6INF0
LinkDB
All DBs
Position
2205481..2207274
Genome browser
AA seq
597 aa
AA seq
DB search
MATCLLAQTASAAPAAQSDFRARKPEQEVIYFVLPDRFENGDRSNDKGGLKGDKFSTGFD
PADKAFYHGGDLKGLMQRLDYIQRLGATAIWVGPIFKNKPVQGPEGNKSAGYHGYWITDF
TQVDPHFGTNADFKALVDAAHARGMKVYMDIIANHTADVIQYREGKEGNYAYRSKADYPY
STHGDASGKAINPGFAGDDVATPRNWAKLTDPSFAYTPFVPKAEKNVKVPAWLNDPIYYH
NRGDTNWKGESSQYGDFVGLDDLATENPRVVEGMIAIYGDWIDRFGIDGFRIDTARHVNP
EFWRAFVPAMLSRARQKGIPNFHIFGEVATGEYDPALLASWTRNAGLPAVLDFAFMHAVI
AAVDGKAGTQELARLGEDDALYQGGGQAALQLPTFLGNHDAGRFAYFIRKANAGIAPEDL
LARVELGHAMLLTLRGVPTIYYGDEQGFGGEGGDQLSRQDMFPSRTAIYNADSLVGTDDT
SAASNFDESHPLYRFIAKLAALRVNTPALTSGTTRLRATSEGPGLFAVSRFDPDTGKEVL
LAFNTSAEPITAQVSVETGSLKFKTLAGAGCPSMATAPGSAAVSLPPLGFAVCAADD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggccacatgcctgctcgcacagacggcctctgccgctccggcggcacagagcgatttt
cgcgcgcgcaagcccgagcaggaagtgatctacttcgttctgcccgaccgcttcgagaac
ggcgatcggtcgaacgacaagggcgggttgaagggcgacaagttctcgaccggtttcgat
ccggcggacaaggccttctaccacggcggcgacctcaagggcctgatgcagcggctcgac
tatatccagcgccttggcgcgacggcgatatgggtcggcccgattttcaagaacaagccc
gtgcagggcccggaaggaaacaagagcgcagggtatcacggttactggatcaccgacttc
acgcaagtcgatccgcatttcggcaccaatgccgatttcaaggccctcgtcgatgcggcc
catgcgcgcgggatgaaggtctacatggacatcatcgccaatcacaccgccgacgtcatc
cagtaccgcgaaggcaaggagggcaactacgcctatcgcagcaaggcggactatccctat
tcgacccatggcgatgccagcggcaaggcgatcaacccgggctttgccggtgacgacgtg
gcgacgcctcggaactgggcgaagctgaccgatccgtcgttcgcctacacacccttcgtg
cccaaggccgagaagaacgtgaaggttcccgcctggctcaacgatccgatctactaccac
aatcgcggcgacacgaactggaagggcgaatcctcgcaatacggcgatttcgtcgggctg
gacgatctggcgaccgagaatccgcgcgtcgtggaagggatgatcgcgatctacggggac
tggatcgaccggttcggcatagacggctttcgcatcgacacggccagacacgtcaatccg
gaattctggcgcgccttcgtccccgcgatgctatcgcgcgcgcgacaaaaaggcatcccc
aattttcatatcttcggggaagtcgcgacgggtgaatacgacccggcactgctggcgagc
tggacgcgcaatgccggtctgcccgccgtgctcgacttcgctttcatgcacgccgtcatc
gctgctgtggacggcaaggcggggacgcaggaactggcgcggctgggagaagacgatgca
ctctaccagggcggagggcaggcggcgttgcaactgcccacgttcctcggcaaccacgat
gccgggcgcttcgcctacttcatcaggaaggccaatgccgggatcgcgcctgaagacctg
ctggcgcgcgtagagctgggccacgccatgctactgacattgcgcggcgtgccgacgatc
tactatggcgacgagcagggtttcgggggcgagggcggcgaccagctatcgcggcaggac
atgttcccctcgcgcaccgcgatctacaacgcggacagcctggtcggcacagacgacacg
agcgcagcatcgaacttcgacgagagccatccgctctacaggttcatcgcgaaactcgca
gcgctgcgggtgaacacgcctgccttgacctccggcaccaccaggctgcgcgcaacgtcg
gaaggcccggggctcttcgccgtctctcgcttcgatcccgacaccggaaaggaagtgctg
ctggccttcaatacctcggccgaacccatcaccgcgcaagtctctgtcgagaccggttcg
ctcaagttcaagacgctggccggcgcagggtgtccttccatggcaacggcgccgggcagc
gccgccgtttcccttccgccgctgggttttgccgtctgcgcggctgacgactga
DBGET
integrated database retrieval system
