Novosphingobium sp. PP1Y: PP1Y_AT215
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Entry
PP1Y_AT215 CDS
T01515
Name
(GenBank) ATP-dependent helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
npp03029
]
PP1Y_AT215
Enzymes [BR:
npp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PP1Y_AT215
Mitochondrial biogenesis [BR:
npp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PP1Y_AT215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
DUF6961
Motif
Other DBs
NCBI-ProteinID:
CCA91001
LinkDB
All DBs
Position
complement(20251..22815)
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AA seq
854 aa
AA seq
DB search
MVQDRNVTARGDAPSGVKAVLGPTNTGKTHLAIERMCAHSSGAIGFPLRLLAREVYDRVC
AIKGEQNVALITGEERIEPKHARYLLCTAEAMPVLDRSLAFVAIDEAQLGADRERGHVFT
DRLLHARGREETMILGSSTLEPMVRALVPRAEIVTRPRFSTLSHAGAKKLSRIPPRSAIV
AFSTEQVYAIAEMLRRFRGGAAVVMGALSPQTRNAQVALYQSGEVDYLVATDAIGMGLNL
DVEHVAFAGLSKFDGVRHRRLTTSEMAQIAGRAGRHQKDGTFGTLTGSGTHDSEFDPEEI
FAIEEHRFPPLTKLFWRDAEPRFDSIATLIGDLETPPDLPELVPAPEAIDLSVLKRLSED
PQVADSVRGAAMVQRFWDVCRLPDFRQQGAETHSRFVARLWQDLRHGELGADYVANAIAQ
LDRTGGDIDTLQGRIAAIRSWAYIAQRPDWVLARDEMAARARAVEARLSDALHGKLTERF
INRRTAVLMKKLGPDAGLLSVRMEDEEVLVEGEHIGSLRGFAFHVDPGARLSDRKLLLAA
AEKHLTALLQKRADELTEAIHAGSAAITLDRGKLKWDGESLGTLAPGRSLLSPVLVPDRT
LDAVPGPARKVLVAALEAWLDNALQPLAPLLKLDEASRSEEAGPDLRALLITLVEAGGMT
SREDSGVDKLDKQRRTMLSRLGVRVGALDVFLPAMLRPGPIVLWRELAQVFGKSPRDGAP
EDAMPPALPAKRRQRTPGYRSLGKQLVRLDMAEKLLREAHEARGGGKPAGSGRSFALDPA
KAVSMGLTTESYARLLRLAGFQPIMPRQLAEGAHGPPAPVRWRWRPPRRHVEETRPQPVR
KDNAFSILADMVRN
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggttcaggaccggaatgtaacggcgcgcggtgacgctccttcaggggtgaaggccgtg
ctcgggccgaccaacaccggcaagactcacctcgccatcgaacggatgtgcgcccattcc
agcggcgcgatcggctttccgctgcgcctgctggcgcgtgaggtttacgaccgggtctgc
gccatcaagggtgaacagaacgtcgccctgatcaccggcgaggaacggatcgagccgaag
cacgctcgctacctgctgtgcacggccgaggcgatgccggtgctcgatcgcagccttgcc
ttcgtcgccatcgacgaagcgcaactgggggcggaccgcgaacgcggccacgtcttcacg
gaccgcctgctccatgcccgcggccgcgaggagacgatgatcctcggttcctcgacgctc
gaaccgatggtcagggcgctcgtaccgcgcgccgagatcgtcacccggccccgcttctcc
acgctcagccatgccggcgcgaagaaactcagccgcattccgccgcgcagcgccatcgtc
gccttctcgaccgagcaggtctatgcgatcgccgaaatgctgcggcgcttccgaggcggg
gcggccgtcgtcatgggcgcgctcagcccgcagacgcgcaacgcgcaagtcgcgctctac
cagtctggcgaagtggattaccttgtcgccaccgacgccatcggcatggggctcaacctc
gacgtcgagcatgtcgctttcgccgggctttccaagttcgacggcgtccgccatcgccgc
ctcaccacgtcggaaatggcgcagatcgcaggacgcgccgggcgtcaccagaaggacggc
acgttcggcaccctcaccggttcgggcacgcacgattccgaattcgatcccgaagaaatc
ttcgccatcgaagaacaccgcttcccgccgctgacgaaactgttctggcgcgatgcggag
ccgcgtttcgacagtatcgccaccctgatcggcgacctggagaccccgcccgacctgccc
gagctggttccggcgcccgaggccatcgacctttccgtcctcaagcgcctgtccgaagac
ccacaggtcgccgattcggttcgcggcgcggcgatggtgcagcgcttctgggacgtgtgc
cgcctgcccgattttcgccagcaaggggcagagacccattcacgcttcgtcgcccgcctg
tggcaggatctgcgccacggcgaactgggcgccgactacgttgccaatgccattgcccag
ctcgaccgcaccggcggcgacatcgacaccctgcagggccgcatcgccgcgatccggtcc
tgggcctatatcgcgcagcgccccgactgggttctcgcgcgcgacgaaatggccgcaagg
gcccgcgcggtggaggcgcgtctgtccgatgccctccatggcaaacttaccgaacgattc
atcaaccgacggactgccgtactcatgaagaaactggggcccgatgccgggctgctctcc
gtgcgcatggaagacgaggaagtactcgtcgaaggcgaacacatcggctcgctgcgcgga
ttcgccttccatgtcgatcccggcgcccgcctgtccgaccgcaagctgctgctcgccgcc
gcggaaaagcacctcaccgccttgctgcagaagcgcgccgacgaattgaccgaggcgatt
cacgcgggaagcgcggccatcacgcttgatcgcggcaaactcaaatgggacggggaatcg
cttggcactctcgccccgggccgctcgctcctgtcgcctgtcctggtccccgaccgcacg
ctcgatgcggtacccggacccgcgcgcaaggtgcttgtggcggcgcttgaggcatggctc
gacaatgcgctgcaaccgctggctccattgctcaagctcgatgaagccagccgttccgag
gaagccggccccgatctcagggccctgctcatcactctcgtcgaagctggcggcatgacg
tcacgcgaggattcgggcgtcgacaaactggacaagcagcgccgcacgatgctctcgcgg
ctcggcgtgcgcgttggcgcgctcgatgttttcttgcctgcgatgcttcgcccgggcccg
atcgtgctgtggcgcgaactcgcgcaggtcttcggcaagtccccgcgcgatggggctccc
gaagacgcgatgccacccgccctgcccgccaagcgccgccagcgcacgccgggttatcgc
agtctgggcaagcagctcgtacgtctcgacatggccgaaaagctcctgcgcgaagcccac
gaggcgcgcggcggcggtaagcccgcgggaagcggacgcagcttcgcgctcgacccggca
aaggcggtgtcgatgggcctgaccaccgaaagttatgcccggctacttcggcttgcaggc
ttccagccgatcatgccgcgccagctggccgaaggcgcccatggcccgccggcgccggtg
cgctggcgctggcgtccgccgcgccgtcacgtcgaggaaacacgacctcagccggtgcgc
aaggacaatgccttttccattcttgcggatatggtgcgcaactag
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