Novosphingobium sp. PP1Y: PP1Y_AT22078
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Entry
PP1Y_AT22078 CDS
T01515
Name
(GenBank) TetR family transcriptional regulator
KO
K22107
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npp03000
]
PP1Y_AT22078
Transcription factors [BR:
npp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PP1Y_AT22078
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GFIT
Motif
Pfam:
TetR_N
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
CCA93064
UniProt:
F6INR2
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Position
complement(2341728..2342420)
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AA seq
230 aa
AA seq
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MSDLADAAQAATQFRSLTPRQRERRARILDAAYALLARHGYDAMSTKMIASHAGVAERTL
FNIYKTKDALIAAAARERSEGFIEEAWSKASDQGIGFFLSLCETLSRRTLEAPEVARALA
PVLVQQADLVALHEVYRRYVGRALEDLVDQDALNPAVIDVVNALVMMRMVSAVTLWAAQA
ITDETLEVHMRLGVCEVLLPHVRGPLHDRSLEEARRCVDVLAQRPGRTAP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatctggcagacgcagcccaagctgcgactcaattccgcagcctgacgccgcga
cagcgcgaacgacgcgcgcgtatcctcgatgcggcctatgccctgctcgctcgccacggc
tatgacgcgatgtcgacgaagatgatcgccagccacgcgggggttgccgaacgcaccctg
ttcaacatctacaagaccaaggacgccctgatcgccgccgccgcgcgcgaacgcagcgag
ggtttcatcgaggaggcctggagcaaggcgagcgatcagggcatcggctttttcctttcc
ttgtgtgaaacgctctcgcgccggacgctcgaagcgcccgaagtggcacgggcattggcc
ccggtgctcgtccagcaggccgatctcgtcgccctgcacgaagtctatcgccgctatgtc
ggaagagcgctggaggacctcgtcgatcaggatgccctgaacccggcggtcatcgatgtt
gtcaacgcactcgtcatgatgcgcatggtgagcgcggtcacgctttgggctgcgcaggcc
atcactgacgaaacactcgaagtccacatgcgcctcggcgtctgcgaggtcctgcttccc
catgtccgtggcccgttgcacgacaggtcgctggaggaagccagacgatgcgttgacgtt
ctggcgcaaaggcccggcagaaccgcaccctag
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