Novosphingobium sp. PP1Y: PP1Y_AT2217
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Entry
PP1Y_AT2217 CDS
T01515
Name
(GenBank) sensory box-containing diguanylate cyclase
Organism
npp
Novosphingobium sp. PP1Y
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
MASE1
PAS_4
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
CCA91192
UniProt:
F6IGC6
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Position
242144..243931
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AA seq
595 aa
AA seq
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MGRVAGTGSAALSLRSTGRALVAACLYFALAAATIRLTSHEGSIATVWPANAVVVAMMLQ
RPRSEWLLYLLAALLGNGAANVVIREAGIGSLMLGLSNLPEILIAAWMFRRIVSADNSLL
HDKRSVISFILAAGLIAPAASTGFGAMTAYLMFDQPIGESVGIWFAADALGLLIFTPFFH
CLIAGHYLQCFRSKSGIERLKTAALQGLVVAVTAGVFAQSTYPLLFVPVLPLILVTFRLG
WLGTNLAVMLIAAIGALATMHGIGPVSLASVRGFWVQPAFFQIYLAFLLLTNMPIAASLN
ERRSLLDRLAERERAIHLLAERSSVLLVNFSPAGRCTQVAGDASSIFSRPAAELVGEDIL
DLQEDCADALMSAHVRAIDNPQGKAVAEIPLGNGRWIEATFTASYDGEGLFAGSIATIFD
ITRRKLRERELADAAQRDELTGVLNRAGFMERFQAAIADKPATGISLALIDVDRFKSIND
ELGHLVGDAVLKEIAARLVNEVRDTDVVGRLGGDEFVILLHTDNSEIAHAICNRIVDRVA
SDPVDMRFGQEVRTQISCGLVYHIAGLGVEDMIHSADMALYAAKRAGRNRLQVAA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgggaagggtcgcaggaacaggcagtgcagcactatcgctgcgttcgacgggcagggcg
cttgtggcagcgtgcctctatttcgcactggctgctgcgacgattaggctcaccagccac
gaaggaagtattgccacggtctggcctgcgaacgcagtcgtggtcgccatgatgctgcag
cgcccgcgctcggaatggctcctttacctgctggccgcattgctgggtaatggcgctgcg
aacgtggtcatacgcgaggccgggatcggttcgcttatgctcgggctgtccaacttgccg
gaaatcctgatcgcggcatggatgtttcgccgcatcgtcagcgcggacaattcgctgctg
cacgacaagagatcggtgatcagcttcattcttgcggccggcctgatcgcgcctgctgcc
agcaccggcttcggggcgatgaccgcctatctgatgttcgaccagcctatcggcgaatcg
gtcggcatctggttcgccgccgatgctcttggcttgctgatcttcacaccgttcttccac
tgcctgatcgccggccattacctccagtgcttccgatcgaagtcggggatcgaacgtctc
aagacggcggccctgcaggggctggtggtcgccgtcaccgcgggtgtatttgcgcaaagc
acttatccgttgctgttcgtgcccgttctgccactgatcctcgtcaccttccggctcggc
tggttggggaccaatcttgcggtcatgctgattgccgcgatcggcgcccttgcaacgatg
cacggtatcgggccggtttcgcttgcctcggttcgcggcttctgggtccaaccggccttc
tttcagatctatctcgccttcctcctgcttaccaacatgcctatcgcggcttcgctcaat
gagcgccgctcactactcgacaggctggccgagcgcgaacgcgcgatccacttgctggcg
gagcgctcgtcggtcctgctggtcaacttctccccggcagggcggtgcacccaggtcgcg
ggcgatgcttcctcgatcttctcccgtccggcggccgagcttgttggcgaggatattctc
gacttgcaggaagattgcgccgacgcgctgatgagcgcccacgtcagggcgatcgacaac
ccgcagggcaaagccgtcgccgaaatcccgctgggcaacgggcgctggatcgaggcgacc
ttcaccgcttcttatgacggcgagggcctgtttgcaggctccatcgccacgattttcgat
atcacgcggcgcaagctgcgcgagcgtgaactggccgatgccgcccagagggacgagctg
accggcgtgctcaatcgcgcgggtttcatggagcgcttccaggccgccatcgcggacaag
ccggccaccggcatcagccttgctctgatcgacgtcgaccggttcaagtcgatcaacgac
gaacttggccaccttgtcggcgatgccgttctaaaggaaatcgccgcgcgcctcgtcaac
gaagtgcgcgacactgacgtggtcgggcgcctcggcggagacgagttcgtcattctcctg
cacaccgacaacagcgagatcgctcatgccatctgcaatcgtatcgtagaccgggtcgcg
agcgatccggtggacatgcggttcgggcaggaagtccggacgcagatcagctgcggcctt
gtctaccatatcgccggactgggagtggaagacatgatccacagtgccgacatggcgctc
tatgccgcgaagcgggcgggtcgcaaccggcttcaggttgcggcctga
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