Novosphingobium sp. PP1Y: PP1Y_AT24138
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Entry
PP1Y_AT24138 CDS
T01515
Name
(GenBank) PAS/PAC sensor signal transduction histidine kinase (fragment)
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP1Y_AT24138
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
npp01001
]
PP1Y_AT24138
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
npp02022
]
PP1Y_AT24138
Enzymes [BR:
npp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PP1Y_AT24138
Protein kinases [BR:
npp01001
]
Histidine kinases
LuxR family [OT]
PP1Y_AT24138
Two-component system [BR:
npp02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
PP1Y_AT24138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
HATPase_c
PAS_9
PAS_4
PAS_8
HisKA
PAS_3
HATPase_c_5
HATPase_c_2
PAS_10
SLATT_2
Motif
Other DBs
NCBI-ProteinID:
CCA93208
UniProt:
F6IP56
LinkDB
All DBs
Position
complement(2532116..2533687)
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AA seq
523 aa
AA seq
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MERQMEKDAPSQSVECRDKSAAPTADEVLHFIDQLNDEAIVMLDLGGRITLWSKGAELLK
GWSAEEVLGRHWSMLYPAAAIAGGRPDQILEIARTDGRYSGEEPRVCSDGTEFLAHVTVY
PLLDSGGRVTGYGKVVRDITEWQRAQTALQTQEAHLRSILDTVPDAMVVIDERGSIQSFS
AAAERLFGYEESDLLGRNVSLLAPSPHREAHDGYLARYLATGERRIIGIGRVVSGRKRDG
GIFPMELAVGEVVQDNGHRLFTGFIRDLTARQDIERRLQDLQEELIHIGRVSAVGTMAST
LAHELNQPLTAVASYVMAAQALLDANQPGALAEAREALADGIAEAVRAGQIVRRLRDFVA
RGETEREIVSLTKLIEEAAALALAGASLRGIRVEMNLDPAVTRVLVDRVQIQQVLLNLIR
NAVEAMEGCERRELVLSTAAMGDEEVELAVADTGAGLSDEIAERLFEPFNSTKAQGLGVG
LSICRTIVEAHEGRLWAEPGSEGGTVFRFTLTRMDRAEPQDDR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcaaatggaaaaagatgcaccgagccagtctgtcgagtgcagagacaagtcg
gcggcgccgacagcggacgaggttctgcatttcatcgaccaactaaatgacgaagccata
gtcatgctcgacctcggtgggcgcataacgctgtggagcaagggcgctgagctcctaaag
ggatggagtgcggaagaggtactgggcaggcactggtcgatgctttatccggccgctgcg
attgccggaggcaggccagatcagatcttagagatcgcccgaacagatgggcgctattct
ggcgaggagccccgggtttgcagcgatgggaccgagtttcttgcgcacgtgacagtctat
ccgttgctggactcaggcggtcgtgtgacgggctatggcaaggttgttcgcgacatcacc
gaatggcagcgtgcccagaccgccttgcagacgcaggaagcccacttgcgctcgatcctg
gacaccgtgccggacgcaatggtggtgatcgacgaacggggatcgattcaatccttcagt
gcggccgccgagcggctgtttggctatgaggagagcgaccttctggggcgtaatgtcagc
ctgcttgctccctccccccatcgcgaggcgcatgacggctatctcgcccggtatctggcg
acgggcgagcgccgcattatcggcatcggccgcgtggtgtccggccgcaagcgtgatggc
ggcattttcccgatggagctcgccgtgggtgaagtcgtgcaggacaatggccaccggctt
tttactggcttcattcgtgatctgacggccaggcaggatatcgagcggcgtctgcaggat
ctccaggaggagttgatccatattgggcgcgtatccgccgtggggaccatggcctcaacg
ttggcccatgaactgaaccagccgctgaccgctgttgccagttatgtgatggctgcgcag
gcgctcctggacgccaatcagccgggcgccttggcagaagcccgtgaggcgcttgccgat
ggcattgccgaggcggtccgggccggccagatcgtgcgccgccttcgcgatttcgtcgcg
cgcggcgaaaccgagcgggaaattgtcagcctgaccaaattgatcgaggaggccgcggcg
cttgcgcttgccggcgcaagcctgcgcggcattcgggtggagatgaatctcgatccggcc
gtgacgcgggtgctcgtcgatcgcgtgcagatccagcaggtgctgcttaacctgatccgt
aacgcggtcgaggctatggaaggctgcgagcgccgagagcttgtgctttcgacggcagcg
atgggcgatgaggaggttgagctggcggttgccgacaccggcgcggggctctcggacgag
attgccgaacggttgttcgagccgttcaacagcaccaaggcgcaaggtcttggcgtgggt
ctttccatatgccgcaccattgttgaggctcacgagggacgtctttgggcagagccgggt
tcggagggaggcacggtgtttcgtttcaccttgacgcgcatggatcgagcggagccgcag
gatgaccgttga
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