Novosphingobium sp. PP1Y: PP1Y_AT24575
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Entry
PP1Y_AT24575 CDS
T01515
Name
(GenBank) putative integrase
KO
K14059
integrase
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PP1Y_AT24575
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GFIT
Motif
Pfam:
Arm-DNA-bind_2
Phage_integrase
Phage_int_M
Phage_int_SAM_3
Int_N
Phage_int_SAM_4
Phage_int_SAM_5
Phage_int_SAM_1
Motif
Other DBs
NCBI-ProteinID:
CCA93250
UniProt:
F6IP98
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Position
2574295..2575455
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AA seq
386 aa
AA seq
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MGRRGRGSGVEPLKSCIRVTFVWLGRRCRETLDLQPTPANIKAAERLMAKVFQEIELGVF
DYETTFPKSAQTAGVRGFTTIAREWLETVTAEKSTMQGYTAAIEKIWGPAFGERQLASIK
PSEIKREIAKLAKRVSGKTVNNNLIPLRAIFATAVDDGIIDRSPLERIRNLSHQAPMPDP
FDREEMERILVYLRDYFDQQVWNWYEFAFGTGMRPSEQIVVQWSDIDWKRRTIRVQRARV
RHVLKSTKTRSARDVDLTSRMIAVLQRQKVHSFMRGADTPVFINPVTNTPWPDVQDQRKL
YFHPALRALGIRSRDAYQTRHTYATTALMAGVNPAYISRQLGHRSAAMLFKHYSKWIDGA
DGGREAAKLEVLYSSDEGGSARAEQA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaggggccgcgggtccggtgtagagccgttgaaatcctgcatacgcgttaca
ttcgtctggcttggcaggcgctgccgggaaacgctcgaccttcagcctacgcccgccaac
atcaaggccgcagagcggttgatggcgaaggtgttccaggagatcgaactcggggtcttc
gactacgaaaccacattcccgaaatctgctcagacggccggggtgcgggggttcacgacc
attgccagggagtggctcgaaaccgtgacggcggaaaaatcgaccatgcaaggctacacg
gcggcaatcgagaagatttgggggccggcattcggcgagcgccagttggccagcatcaag
cccagcgagatcaagcgagaaatcgccaagctggccaagcgtgtcagcggaaagaccgtc
aacaacaaccttattcctttgcgcgccatttttgccactgcggtcgacgatgggattatc
gaccgatctcccctcgagcggattcgtaacctcagccatcaggcgccgatgcccgatcca
ttcgaccgcgaggagatggagcggatccttgtctacctacgcgactacttcgaccagcaa
gtctggaactggtacgaattcgccttcggaacgggtatgcgaccgagtgaacagatagtc
gtccagtggagcgacatcgactggaaacgccggaccatccgcgttcagcgagcccgcgta
cgtcacgtcctcaagtcgaccaagacccgaagcgctcgagatgtcgatctcaccagccgt
atgatcgccgtgctccaacggcagaaagtacacagcttcatgcggggtgcggatacaccg
gtcttcatcaatccggtgacgaacacgccgtggccggacgtacaggatcagcgcaaactt
tattttcatcccgccctgcgggcattgggcatccggagccgcgatgcctatcagacgcgt
catacttacgcgacgacggcgctcatggcgggcgtgaaccctgcctacatctcacggcaa
ttaggtcatcgcagcgcggccatgctgttcaagcattattcgaagtggatcgacggtgct
gacggcgggcgagaagcagcgaaactcgaggttctctacagcagcgatgaaggtggctcg
gcaagggccgaacaggcgtaa
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