Novosphingobium sp. PP1Y: PP1Y_AT24734
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Entry
PP1Y_AT24734 CDS
T01515
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PP1Y_AT24734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT24734
Enzymes [BR:
npp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PP1Y_AT24734
DNA repair and recombination proteins [BR:
npp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PP1Y_AT24734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
CCDC93_CC
PUMA_CC
Motif
Other DBs
NCBI-ProteinID:
CCA93264
UniProt:
F6IPB2
LinkDB
All DBs
Position
2591433..2591687
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AA seq
84 aa
AA seq
DB search
MNGETPNIDALSFEDALRALEDVVRKLESGDVPLEDSITLYERGEELRKHCQKRLDAAQA
RIEKIVAGPDGMPSGTQPFDAADR
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagagaccccgaacatcgacgccttgagctttgaggatgcgctgcgcgcgctg
gaagacgtggtgcgcaagctcgaaagcggcgatgtgccgctggaagattcgatcacgctc
tacgaacgtggtgaagagctgcgcaagcattgccagaagcgcctcgatgcggcccaggca
cggatcgagaagatcgtcgccggacccgacgggatgccgtccggcacccagcctttcgat
gccgcggatcgctga
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