Novosphingobium sp. PP1Y: PP1Y_AT25058
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Entry
PP1Y_AT25058 CDS
T01515
Name
(GenBank) conserved hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT25058
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT25058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
CCA93301
UniProt:
F6IPE9
LinkDB
All DBs
Position
2628232..2632446
Genome browser
AA seq
1404 aa
AA seq
DB search
MEEAVVIERPSLLQRAKVRALKTVALIGIGIVALAVLVIFGIDTGPGRRFVADQIAALEF
ENGMKISVGRIEGSLYGKMTLHDLSVRDPKGEFLFSPEIHVDWNPFDYFSNHVNVRSATA
QRMILRRAPQFRETPPSDAPLLPDLDIDVGAMRVGNFVFEPAVSGERRIMSFAGKVHIAD
GRAQVDAKGATIAIAGKEGGDRFDLSLDAVPKQNRLGIGLDLDAPTGGVIASLAGLTQPL
TLEVDGKGTWAAWNGKLAANYGTGDLARLDLTARDGTFAIKGPTRFARMFSGPTANLLGP
VTNVDVKAVLADRRANVSGMISSDAFNLTPNGLVDLSDNSFEDFKLAFVLLKPSALAKNL
SGAGTRAILTLDGAFTAPKVGYRISASRLVMNDMGLQGFLAEGAARVDAGKIMIPVSARV
ERITGLDTVAGGTLPNVRLNGDLAIDGARILSDNMRLRSDRIDAGLILVADVGKGLYTGA
IDGKIDNYRLASVGIFNIRTDMDLESKGNGFALDGTVRAQSTRLLNDSLKGYLGGNFAAA
SHVNYGTDGLVRFSNLQMTAPDLKVRGGRGFWSPDGRISLVADGTSDRYGAIGVRVAGTI
ADPDAHITADKPNLGIGLANLDARVTGARGGYNLALTGDTDYGPLKADVTLGMGQAMSLQ
INEANLSGVAFAGKLGQTRSGPFAGELTATGNGVNGVLTLSAERKYQAIDFNLRAQDSTF
AGPANLTIRSAIIDGRAVLYDQPSLVADAQISGTRMGALRIAVARALIDYRNGRGKAKAM
LEGYSGVPFKLALNGDLQPDVWRIALDGKVRGQSVKTTSPARILPKEDGYELLPTKLAFG
GGSAKIAGTYGTGMKLQSRLENIDMTMLNAFLPGYGFGGSASGSLDFEQADPAAFPRADA
RLTLNKFTRTSSDIVSQPVDINFVGKLLADGGEARAVFRRSGSVIGRMVASLRPLPPGSG
PWTERLFDAPLGGGIRYNGPADTLFSFAGMSGQTLSGPMGLAADFSCKLSDPCLNGIVRG
KDLVYENQTYGTRLSKLNFAGKFDGNRMELETLSAKAGDGTLSANGFVSLAADQGYPMDI
SVELEKARLARSSSISASATGNLRLSKQAGEDALLSGDLRLPETRYQIVREGSAEVPRLT
GVRFKPRRGPERITGDEPAEPISSMFSRLRLDLRMRAPEKLYVSGMGLESEWKAKFTIGG
TSAAPTMAGDVELIRGTLGFAGRSFELTQGVISFNGGRTIDPAVAITAQESIDDVDVTVE
VGGRAYSPQITFSSTPSLPQDEVLSRILFGSSIANLSAIQAVQLASSLNSLNSTGGGLNP
LGQLRSATGIDRLRILGADEASGRGTALAAGQYLTDDVYVELITDARGFTATQLEVSVTK
WLSVLSQAGGSGVNSVNLRIKKNY
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcggtcgtgatcgaacggccctcgctgttgcagcgcgccaaggtgcgcgcg
ctcaagaccgttgcgctgatcggcatcggcatcgtggcgcttgcggtcctggtgatcttc
ggcatcgataccggaccggggcggcgtttcgtcgccgaccagatagccgctctcgaattc
gagaacggcatgaagatctcggtcgggcggatcgagggctcgctctacggcaagatgacc
ctgcacgatctgtcggtgcgcgatcccaagggcgagttcctgttctcgcccgagatccac
gtcgactggaatcccttcgactatttcagcaatcacgtgaacgtgcgcagcgccacggca
cagcgcatgatcctgcgccgggcgccgcagtttcgcgagacgccgcccagtgatgcgccc
ttgctgccggatctcgatatcgacgtgggcgcgatgcgcgtcggcaatttcgtcttcgag
ccggcggtatcgggcgagcggcggatcatgtcgttcgccggtaaggtgcacatcgccgac
ggcagggcacaagtggacgccaagggcgcgacgatcgcgattgccggcaaggagggggga
gatcgcttcgatctctcgctggatgccgtgccgaagcagaaccgtctgggcatcggcctg
gatctcgacgcgccgacgggaggcgtgatcgcctcactggctgggctgacgcagccgctg
acgctcgaagtcgacggcaagggcacatgggccgcctggaacggcaagctcgccgcgaac
tatggaaccggggatctcgcgcggctggatctcactgcgcgcgacggaactttcgcaatc
aagggaccgacccgctttgcacgcatgttcagcgggccgaccgcgaacctgctcggtcca
gtcaccaatgtcgacgtaaaggcagtgctggcggaccggcgcgcgaacgtgtcgggcatg
atttccagcgacgcgttcaacctcacccccaatggcctcgttgacctttcggacaacagc
ttcgaggacttcaaactggctttcgtgctgctcaagccttctgccctggcgaagaacctg
agcggagcgggcactcgcgctatcctgacgctggacggtgccttcaccgcgcccaaggtc
ggctatcgcatcagcgcgagccggctggtgatgaacgacatgggcctgcagggcttcctc
gcagaaggcgccgcgcgggttgacgcgggcaagatcatgatcccggtctcggcgcgggtc
gagcggatcaccggcctcgatacggtggccggcgggacattgcccaatgtccgcctcaac
ggcgatctggcgatagacggggcgcgcatcctgtccgacaacatgcggctgcgctccgat
cgtatcgatgccgggctgatccttgtcgccgatgtcggcaaggggctctacaccggcgcc
atcgacggcaagatcgacaattatcgccttgccagcgtgggcatcttcaacatccgcacc
gacatggacctcgaaagcaaggggaacggctttgccctggacggcacggtgcgggcacaa
tcgacgcgcctgctgaacgacagcctcaagggctatctcggcggcaatttcgcagcggcc
tcgcacgtgaattacggcaccgatggcctcgtgcgcttctccaacctgcagatgaccgcg
ccggacctcaaggtgcgcggcggccgcggcttctggtcgcctgacgggcgcatttccctc
gtcgccgatggaacgtcggatcgctacggcgctatcggcgttcgcgtggccgggacgatt
gccgatcctgacgcccatatcacggcggacaagcccaacctcggcatcggcctcgccaac
ctcgatgcgcgggtgaccggcgcgcggggcggctacaacctcgccctgaccggcgatacc
gactacggcccgctcaaggccgatgtcacgctgggcatggggcaggcgatgtccctgcag
atcaacgaggccaatctttccggcgtcgccttcgcaggcaagctcggccagacccgcagc
ggcccctttgccggtgagctgactgccacaggcaacggtgtgaacggggttctgaccctc
tcggccgagcggaaataccaggccatcgacttcaacctgcgcgcgcaggattcgactttc
gccggccctgcgaacctgacgatccgttctgccatcatcgacgggcgcgcggtcctttac
gatcagcccagtctggtggccgacgcccagatttccggaacccgtatgggggcgcttcgc
atcgccgtggcgcgcgcgctgatcgattaccgcaatggccggggcaaggcgaaagcgatg
ctcgaaggctatagcggagtacccttcaagctggcgctgaacggtgacctgcagcccgat
gtctggcgcatcgcgcttgacggcaaggttcgcggtcagagcgtcaagactacgtcgcct
gcccggatcctgccgaaggaagacggatacgaactcttgccgaccaagctggccttcggc
ggtggctcggccaagatcgcgggcacctatggcaccggcatgaagctgcagagccgtctt
gagaacatcgacatgaccatgctcaatgctttcctgcccgggtatggcttcggcggttcg
gcgagcggcagtctcgactttgagcaggccgatcccgccgcatttcctcgtgccgatgcg
cggctgacgctcaacaaattcacccgcaccagttcggacatcgtcagccagcctgtcgac
atcaatttcgtcggcaagctcctggctgacggcggcgaggcgagagcggtgttccggcgc
agcggttccgtgatcgggcgcatggtcgcaagcctgcggcccttgccgccgggcagcggc
ccgtggaccgagcgcttgttcgatgccccgctgggcggcggtatccgatacaacggcccg
gccgataccctgttctcgttcgcgggaatgtcggggcagaccctcagcggcccgatgggg
ctggcggccgacttctcctgcaagctttccgatccgtgcctgaacggcatcgtgcgcggc
aaggacctggtttacgaaaaccagacttacggcacgcggctgtccaagctcaattttgcg
ggcaagttcgacggcaaccggatggaactggaaacgctgagcgccaaggcaggcgatggc
acgttgagcgcaaacggctttgtcagcctggccgccgaccaaggctatccgatggacatc
tcggttgagctggaaaaagcgcggctagcgcgcagcagttccatttccgccagcgcgacc
ggcaacctgcgcctgagcaagcaggccggagaggatgcgcttctttccggcgacctgcga
cttcccgaaacacgctaccagatcgtgcgagaaggctcggccgaagtgccgcggctgacc
ggagtgcgcttcaagccgcggcgcggcccggaacgcattaccggtgacgagcccgctgaa
ccgatctcgtcgatgttctccaggctacgcctcgacttgcgcatgcgtgcgccggagaaa
ctctacgtctcgggcatggggcttgagtccgagtggaaggcgaaattcaccatcggcggt
accagtgcggcgccgacgatggccggcgacgtcgaactgatccgcggtacgctcgggttc
gctggacgctcgttcgaactgacccaaggcgtgatttcgttcaacggcggaaggaccatc
gatcccgcggtggcgatcaccgcgcaggaatcgatcgacgatgtcgacgtgaccgtggaa
gtgggcggcagggcctacagcccgcaaatcactttcagctcgacgcccagcctgccgcag
gacgaggtgctctcgcgcattctgttcggcagctccatcgccaacctttcggcgatccag
gcggtacagctggcatcctcgctcaattctctcaactcaaccgggggcgggctcaatccg
cttgggcaactgcgctcggccacggggatcgaccgcctgcgcatcctgggtgctgacgag
gcatcgggccggggcacggctctggcggcaggtcagtatctgaccgacgacgtctatgtc
gaactgatcaccgatgcgcgcggctttaccgcgacgcagctcgaggtcagcgtgaccaag
tggctgtcggtgctgagtcaggccggcggttcgggcgtcaacagcgtgaacctgcgcatc
aagaagaactattga
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