KEGG   Novosphingobium sp. PP1Y: PP1Y_AT25467
Entry
PP1Y_AT25467      CDS       T01515                                 
Name
(GenBank) topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
npp  Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:npp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:npp03032]
    PP1Y_AT25467
   03036 Chromosome and associated proteins [BR:npp03036]
    PP1Y_AT25467
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:npp02048]
    PP1Y_AT25467
Enzymes [BR:npp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PP1Y_AT25467
DNA replication proteins [BR:npp03032]
 Prokaryotic type
  DNA Topoisomerases
   PP1Y_AT25467
Chromosome and associated proteins [BR:npp03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    PP1Y_AT25467
Prokaryotic defense system [BR:npp02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    PP1Y_AT25467
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: CCA93338
UniProt: F6IPI6
LinkDB
Position
complement(2672619..2674625)
AA seq 668 aa
MADDLFDKLPSAGGESYDGSAIEVLEGLEPVRRRPGMYIGGTDERALHHLAAEVLDNAMD
EAVAGHANRIEVLLEEEPGTAGRLTITDNGRGIPVDEHPKYPGKSALEVILSTLHSGGKF
SGKAYATSGGLHGVGISVVNALSVKTRVEVARNKELFAQEFSRGATLGPLQKVGAAPNRR
GTSVTFTPDTEIFGDQKFKPNRLFKLVRSKAYLFAGVEIRWKCSPSLASDDVPAEATFQF
PGGLADHLAEQIGSRECVTAQFFSGSQEFPENDQGLELGRVEWAIAWPLYSDGAYSWYCN
TIPTPDGGTHEQGLRAALTKGIRAFGDLVGQKKAKDITPDDIVVGSETMLSVFIRDPQFQ
SQTKDRLTSPEAARLVENAIRDHFDHFLSDNLDRGKALLGAVMERMDDRLRRKAERDVKR
KTATNAKKLRLPGKLTDCSGEGNGETELFIVEGDSAGGSAKQARDRKTQAILPIRGKILN
VASATSDKIRGNQEIADLNLALGCGSRKDCNADNLRYDRIIIMTDADVDGAHIATLLMTF
FFQEMPDIVKRGHLYLAQPPLYRLTAGSTSAYARDDAHRAELEATKFKGKKVEVGRFKGL
GEMNPQQLRETTMSPDSRSLIRITLPPEYEDRAAVKDLVDRLMGRNPEHRFQFIQNRAGE
IDRDLIDA
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggccgatgacctcttcgacaagctgccgtctgcgggcggagaatcctacgacggttcc
gcgatcgaagttctggagggtctcgaacccgtccggcgacgccccggcatgtacatcggc
ggcaccgatgaacgcgcgcttcatcacctcgcggccgaagtcctcgacaacgcgatggac
gaagccgtcgccggccacgccaaccgcatcgaagtcctgctggaggaagaaccgggaacg
gccggtcgcctgacgatcaccgacaacggacgcggcatcccggtcgacgaacaccccaag
tatccgggcaagtcggcgctcgaggtcattctttcgaccctgcactcgggcggcaagttc
tccggcaaggcctatgccacttccggcggcctccacggtgtcggcatctcggtggtcaat
gccctttcggtgaagacacgcgtcgaagtggcccgcaacaaggaactcttcgcgcaggag
ttctcgcgaggtgcaacgctcggcccgctgcagaaggtcggcgccgcgcccaaccgccgc
ggtacgtccgtcaccttcacccccgataccgagatcttcggcgaccagaagttcaagccg
aaccgcctgttcaagctggttcgttccaaggcctacctcttcgccggagtcgagatccgc
tggaagtgctcgccctcgctcgccagcgacgacgttccggccgaagcgacgttccagttt
ccgggcggccttgccgaccatcttgccgagcagatcggcagccgcgaatgcgtgactgcg
cagttcttctccggttcgcaggaattcccggaaaacgatcagggcctcgaactgggccgc
gtcgaatgggcaatcgcctggccgctctactcggacggcgcctattcctggtactgcaat
accatcccgacgcccgatggcggcacgcacgagcagggcctgcgcgctgcgctgaccaag
ggcatccgcgccttcggcgatctcgtcgggcagaagaaggccaaggacatcacccctgac
gacatcgtcgtcggttcggaaacgatgctctcggtcttcatccgcgatccccagttccag
agccagacgaaggaccggctcaccagtccggaagccgcccgcctcgtcgagaacgcgatc
cgcgaccatttcgaccactttctttcggacaacctcgatcgcggcaaggccctgctcggt
gcggtcatggagcgcatggacgatcgcctgcgccgcaaggccgaacgcgacgtcaagcgc
aagacagcaaccaatgccaagaagctgcgcctgcccggcaagctcaccgactgttcgggc
gaaggcaacggcgagaccgagctgttcatcgtcgagggcgattccgcaggcggttcggcc
aagcaggcacgtgaccgcaagacgcaggcgatcctgccgatccgcggcaagatcctcaac
gtcgccagcgccacctcggacaagatccgcggcaaccaggaaatcgccgacctcaacctt
gcgctcggctgcgggtcgcgcaaggactgcaatgcggacaacctgcgttacgaccgcatc
atcatcatgaccgacgccgacgtcgacggcgcgcatatcgcgacgctgctgatgacgttc
ttcttccaggaaatgccggacatcgtgaagcgcggccacctctaccttgcccagccgccg
ctctatcgcctgaccgcgggctcgacctcggcctatgcccgtgacgatgcccaccgcgcc
gaactcgaagcgacgaagttcaagggcaagaaagtggaagtcggccgcttcaagggtctc
ggtgaaatgaacccgcagcagctgcgcgagacgacgatgagcccggattcccgctcgctc
atccgcatcaccttgccgcccgagtacgaagaccgggccgcggttaaggacctcgtcgat
cgcctgatgggccgcaaccccgagcaccgtttccagttcatccagaaccgcgccggcgaa
atcgaccgcgacctgatcgacgcctga

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