Novosphingobium sp. PP1Y: PP1Y_AT26008
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Entry
PP1Y_AT26008 CDS
T01515
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00450
Selenocompound metabolism
npp00970
Aminoacyl-tRNA biosynthesis
npp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PP1Y_AT26008
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PP1Y_AT26008
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
npp01007
]
PP1Y_AT26008
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npp03016
]
PP1Y_AT26008
Enzymes [BR:
npp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
PP1Y_AT26008
Amino acid related enzymes [BR:
npp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PP1Y_AT26008
Transfer RNA biogenesis [BR:
npp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PP1Y_AT26008
Prokaryotic type
Other AARSs
PP1Y_AT26008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
Anticodon_3
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1c
Motif
Other DBs
NCBI-ProteinID:
CCA93385
UniProt:
F6IPN3
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All DBs
Position
2729054..2730613
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AA seq
519 aa
AA seq
DB search
MGEPYYVTTAISYPNGKPHIGHAYEAIATDVIARNRKAEGFDVRFQTGTDEHGLKMMQKA
RDLGVTPAALCDEMSRYFRDMCDALNIGYDVFIRTTEPRHHEATQELWRRMEANGDLYLD
RYEGWYSIRDEAYYDESELVAGEGGEKLSPQGTPVEWTVEESWFFRLSKYQDKLLELYSS
GDFIKPESRRNEVTRFVEGGLRDLSVSRTSFDWGIKVPGSENHVMYVWVDALTNYLTGLG
FPDENGDYSKYWPANLHVIGKDIVRFHAIYWPAFLMSAGVPLPRQVFGHGFLLNRGQKES
KSLGNVTDPIGLAETFGVDALRYFLMREVAFGQDGSYSPEAIVTRCNAELANSFGNLAQR
SLSMIFKNMDGIVKAGLPQTEADAALFASVREGIAGLRKSFTDLAFSDGLESWMRAVFAC
NQYVDEQAPWALRKTDPERMEAVLMVLFQVVRDLAIAVRPVVPTAIDKLLDQMGQGADAR
DYAALEAADWFTALAASGYKVDKPQGVFPRLELPEEAAA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagccctattacgtcaccaccgccatcagctatcccaacggcaagccgcatatc
ggccatgcctacgaggcaatcgctaccgatgtcatagcccgcaaccgcaaggctgaaggc
ttcgacgtccggttccagaccggaacggacgaacatggcctgaagatgatgcagaaggcg
cgcgacctcggcgtgacgccggctgcgctctgtgatgaaatgtctcggtacttcagggat
atgtgcgatgcattgaacatcggatacgatgtcttcatccgcactaccgagccgcgtcac
cacgaggcgacacaggaattgtggcgccgcatggaagccaacggcgacctttacctcgac
cgctatgaaggctggtactcgatccgcgacgaagcctattacgacgagagcgaactcgtc
gcaggcgagggcggcgaaaagctatccccgcaaggcacgccggttgaatggactgtcgag
gaatcgtggttcttccgcctgtcgaagtaccaggacaagttgctcgaactctacagctcc
ggtgatttcatcaagccggaaagccgccgcaacgaagtgacgcgcttcgtcgaaggtggc
ctgcgtgacctttcggtttcgcggacgagcttcgactggggcatcaaggttccgggtagc
gagaaccacgtcatgtacgtctgggtcgatgctttgaccaactacctgaccggcctcgga
tttcccgatgaaaacggcgactattcaaagtattggccggcaaacctgcatgtgatcggg
aaggacatcgttcgtttccatgcgatttactggcccgccttcctgatgagcgctggcgtg
ccgctgccgcgccaggtcttcgggcacggcttcctgctaaaccgcggacagaaggaatcg
aagtcgctcggcaatgtgaccgatccgatcggccttgccgaaaccttcggtgtcgatgcc
ctgcgctatttcctcatgcgtgaggtggcattcggacaggacggttcctactcgcccgag
gctatcgtcacgcgctgcaatgctgagctcgcgaacagcttcggcaaccttgcccaacgc
agtctatccatgattttcaagaacatggatggcatagttaaggccggattaccgcaaacc
gaagccgatgcggcgctctttgcatcggtccgggaaggcatcgcggggctgcgcaagagc
ttcaccgacctcgccttcagtgacggtctcgaaagctggatgcgcgccgtcttcgcctgc
aaccagtacgttgacgaacaggccccatgggcgctgcgcaagaccgatcccgaacggatg
gaagcggttctcatggttctgttccaggtcgtgcgcgatctcgccatcgccgtacgtcct
gtggtgccgacagcgatcgacaagttgctcgaccagatggggcagggtgcagatgcgcgc
gactatgccgcgctggaggcggccgactggttcaccgcactggctgcttcgggttacaag
gtggacaagccgcagggcgtattcccgcggctcgaactgcctgaggaagccgccgcctga
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