KEGG   Novosphingobium sp. PP1Y: PP1Y_AT27166
Entry
PP1Y_AT27166      CDS       T01515                                 
Name
(GenBank) glutamyl-tRNA synthetase
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp00860  Porphyrin metabolism
npp00970  Aminoacyl-tRNA biosynthesis
npp01100  Metabolic pathways
npp01110  Biosynthesis of secondary metabolites
npp01120  Microbial metabolism in diverse environments
npp01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:npp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    PP1Y_AT27166
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    PP1Y_AT27166
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:npp01007]
    PP1Y_AT27166
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:npp03016]
    PP1Y_AT27166
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:npp02048]
    PP1Y_AT27166
Enzymes [BR:npp01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     PP1Y_AT27166
Amino acid related enzymes [BR:npp01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   PP1Y_AT27166
Transfer RNA biogenesis [BR:npp03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    PP1Y_AT27166
 Prokaryotic type
   Other AARSs
    PP1Y_AT27166
Prokaryotic defense system [BR:npp02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    PP1Y_AT27166
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2 XRCC4
Other DBs
NCBI-ProteinID: CCA93493
UniProt: F6IPZ1
LinkDB
Position
2852967..2854421
AA seq 484 aa
MASGSASSGSNGQSAVVTRFAPSPTGYLHIGGARTALFNWLFARHHGGKYLLRIEDTDRA
RSTEPAIDAIFDGLTWLGLEGDEEPVFQFARSQRHAEVAAQLLESGHAYRCYLTTEELAE
RRQKAQEERRPFRIDSEWRDADPATWPSDRPYVVRIKAPRDGETVIDDLVQGQVTVQNVE
IDDFVILRSDGTPTYMLAVVVDDNDMGVSHVIRGDDHLNNAFRQLVIIRAMDWSVPTYGH
VPLIHGPDGAKLSKRHGALGVDAYRDELGVLPEALFNYLLRLGWGHGDEEIIARDQAVEW
FDIAHVGKSPARFDLAKLQNLNGHYLREADDARLAALVLPLVAANGFADADPVLLEKAMP
VLKVRAKDVNELAEGAAFLFATRPLAMSEKAQALLTDEARGRLAVIHERLSGESDWTLEA
LEANLKAMAGELELGLGKLAQPLRAALTGQTTSPGIFDVLVLLGRNESLARIAAQAEVPA
GSQV
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggcaagcggcagtgcatcgagcggatcgaacggccagtcagccgtcgttacgcgcttt
gccccctcgcccacgggttaccttcacatcggcggcgcccgtacggcgctgttcaactgg
ctcttcgcccgccatcacggcggcaaatacctgcttcgcatcgaagacaccgaccgcgcc
cgttcgaccgaaccggccatcgacgcgatcttcgacggcctgacctggctcggcctcgaa
ggcgacgaagaaccggtattccagttcgcgcgctcgcagcgccacgccgaagtggccgcc
caattacttgaatccggtcacgcctatcgctgctacctcacgaccgaggaactcgccgag
cgccgccagaaggcgcaggaagagcgccgcccgtttcgcatcgacagcgaatggcgcgac
gccgatcccgcgacctggccgagcgatcgcccctacgtcgtgcgcatcaaggccccgcgc
gatggcgagaccgtaatcgacgatctcgtgcagggacaggtcacggtccagaacgtcgag
atcgacgacttcgtcatcctgcgctccgacggcacgccgacctacatgctggctgtcgta
gtcgacgataacgatatgggcgtatcccacgtcatccgcggcgacgatcacctcaacaac
gcctttcgtcagctcgtcatcatccgcgccatggactggtcagtgccgacttacggccac
gtaccgctgatccacggcccggacggcgccaagctgtccaagcgccacggcgcgctcggc
gtcgatgcctatcgcgatgagctgggcgtgctgcccgaagcgctgttcaattatctgctg
cggctcggctggggacatggcgacgaggaaatcatcgcccgcgaccaggcggtcgagtgg
ttcgacattgcccacgtcggcaagtcgccagcccgcttcgaccttgccaagttgcagaat
ctcaacggacactacctgcgcgaggcggatgacgcccgcctcgcggcactcgtccttccg
ctcgtggcggccaatggcttcgcggacgcagatcccgtcctgctcgaaaaggccatgcct
gttctcaaggtgcgagcaaaggacgtcaacgaacttgcagaaggcgccgccttcctgttt
gccacccgtcctctcgcgatgagcgagaaggcgcaagctcttctgaccgacgaggcgcgg
gggcgccttgctgtcattcacgagcgtctgtcgggggaatccgactggactttggaggca
ttggaagccaacctgaaagcaatggccggggaactcgaattgggcctcggtaagctcgcg
caacccttgcgggcagccctgacgggtcagacgacctcgccgggaattttcgacgtattg
gttctgctcggcaggaacgaaagcctcgcgcgcattgccgcacaggccgaagtcccggcc
gggtcacaggtataa

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