Novosphingobium sp. PP1Y: PP1Y_AT27810
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Entry
PP1Y_AT27810 CDS
T01515
Name
(GenBank) primosomal protein N' (replication factor Y) (superfamily II helicase)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PP1Y_AT27810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT27810
Enzymes [BR:
npp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PP1Y_AT27810
DNA repair and recombination proteins [BR:
npp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PP1Y_AT27810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
AAA_22
Zn_ribbon_6
PIF1
Fe-ADH
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CCA93558
UniProt:
F6IQ56
LinkDB
All DBs
Position
2921872..2924049
Genome browser
AA seq
725 aa
AA seq
DB search
MPRKMNRVRLLVFNAALGVLDYRVPEGMTVEPGSVVVGPLGPRQVLGIVWEPERLTAQEV
PEAKLRPLLEVLPVPPLPARLRRLIEWTADYYCAQLSSVARMALGSSAALRGGGTTTEYR
LTGEEPARLTPQRAAALDALQGEQASIRELAELASVSEGVLRGMVGAGLLEPVTVDLDRP
YPPARPDFDQPKLSEGQRKAADTFVDAVKARKFAPFLLDGVTGSGKTETYFEAVAEAIRE
GRQILVLLPEIALTENFLRRFEQRFGVSPVQWHSSLKASERRRAWRAIAFGDAQVVVGAR
SALFLPYPKLGLIVVDEAHEVSFKQDDGVRYNARDVAVIRAKFEQIPVILASATPALESM
QLAEAGVYRKIELPDRFGGATLPQINILDLRHEPPERGRWLAPRLVDEMKERLARGEQSL
LFLNRRGYAPLTLCRNCGYRFQCPNCTAWLVEHRFSQRLACHHCGHETPVPEACPDCGTA
DCLVACGPGVERIADEVAEILPEARTALVTSDTMNNPEAIAEFVAMAEGRAIDVIIGTQL
VTKGYHFPELTLVGVVDADLGLEGGDLRAAERTYQQVAQVAGRAGRGEKPGEVLIQTRHP
EASVIAALAAGDRDAFYAAETEARRDAGAPPFGRWAAIIVSSEDLSEAQSAARAIGGTAP
DHPDMLVLGPAPAPLSLLRGRHRFRLLINARRSAELQRYLREWLDPLEFPRGVRVHIDID
PYSFV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccccggaaaatgaaccgtgtccgactccttgtcttcaacgccgcgctgggcgtcctc
gactatcgcgttcccgaagggatgaccgtggagcccggctccgtggtcgtaggtccgctc
ggtccgcggcaggtactcggcatagtctgggaaccggaacgcctgaccgcacaggaagtg
cccgaggccaagctgcgcccgcttctggaagtgctgccggtaccgcccctgcccgcccgg
ctgcgccgcctgatcgagtggacggccgactactactgtgcgcagctctcatccgtcgcc
cgcatggcgctgggcagcagcgcggcgctgcgcggcggcggaacgacgaccgaatatcgc
ctgaccggggaggagccggctcgcctgacaccccagcgtgcagcagcgctcgatgctttg
cagggcgaacaggcatcgatccgcgagctggcagagctggccagcgtatccgagggcgtc
ctgcgcggcatggtgggcgcaggtctgctggaaccggtaaccgtggatctcgacaggccc
tatcccccggcccggcccgatttcgatcagccgaaactcagcgaaggccagcgcaaggcc
gccgacactttcgtggacgcggtgaaggcccgcaagttcgccccgttcctgctcgacggc
gtgaccggctcgggcaagaccgaaacctatttcgaagccgtggccgaggcgatccgcgaa
ggccggcagatcctcgtgctcctgcccgagatcgccctgaccgagaactttctgcgccgc
ttcgagcagcgcttcggggtctcgcccgtgcagtggcactcctcgctgaaggccagcgaa
cgccgccgtgcgtggcgcgcgatagccttcggggatgcccaggtcgtggtcggagcgcgc
tcggccctgttcctgccttacccaaagctcgggctgatcgtcgtcgacgaggcccatgag
gtttccttcaagcaggacgacggcgtgcgctacaatgcccgcgacgtcgccgtgatccgc
gccaagttcgagcagattccggtcattctcgccagcgcgacacccgcgctcgaatcgatg
cagcttgccgaggcgggggtctatcgcaagatcgagctgcccgaccgcttcggcggtgca
acgctgccgcagatcaacattctcgacttgcgccacgagccgcccgagcgcggccgctgg
ctcgctccgcgcctcgtcgatgaaatgaaggagcggctggcgcgcggcgaacagtcgttg
ctgttcctcaatcggcgcggctatgccccgctcaccttgtgccgcaactgcggctaccgc
ttccagtgcccaaactgcaccgcctggctggtcgagcaccgcttctcgcagcgcctcgcc
tgccatcactgcggacacgagacgccggtacccgaggcctgtcccgattgcgggaccgcg
gactgcctcgtcgcgtgcgggccgggcgtcgagcgcattgccgatgaggtcgccgagatc
ctgcccgaggcccgcaccgcgctggtcacttcggacacgatgaacaatcccgaggccatc
gccgaattcgtggccatggccgaggggcgcgcgatcgacgtgatcatcggcacgcagctt
gtcaccaagggctatcactttcccgaactgacgctggtcggcgtcgtcgatgccgatctg
ggcctagaaggcggggacttgcgcgcggcggagcggacctaccagcaggtcgcacaagtc
gccgggcgcgcagggcgcggcgagaagcctggcgaagtgctgatccagacccgccatccg
gaggcctcggtgatcgccgcgctggccgcgggagaccgcgacgccttctacgctgcggaa
accgaagcgcgccgcgatgcgggcgcgccgccgttcgggcgctgggccgccatcatcgtt
tcgtcggaagatctttcagaagcgcagtccgccgcccgtgccatcggcggcaccgcgccc
gaccacccggacatgctcgtcctcggccccgcacctgccccgctttcgctgctgcgcgga
cgccaccgcttccgccttctcatcaacgcgcggcgctcggccgaactgcagcgctacttg
cgcgaatggctcgatccgctggaattcccgcgcggcgtgcgggtccatatcgacatcgac
ccctacagcttcgtgtga
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