KEGG   Novosphingobium sp. PP1Y: PP1Y_AT28138
Entry
PP1Y_AT28138      CDS       T01515                                 
Name
(GenBank) topoisomerase IV subunit A
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
npp  Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:npp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:npp03032]
    PP1Y_AT28138
   03036 Chromosome and associated proteins [BR:npp03036]
    PP1Y_AT28138
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:npp02048]
    PP1Y_AT28138
Enzymes [BR:npp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PP1Y_AT28138
DNA replication proteins [BR:npp03032]
 Prokaryotic type
  DNA Topoisomerases
   PP1Y_AT28138
Chromosome and associated proteins [BR:npp03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    PP1Y_AT28138
Prokaryotic defense system [BR:npp02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    PP1Y_AT28138
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C DUF7683 DUF4890
Other DBs
NCBI-ProteinID: CCA93592
UniProt: F6IFT4
LinkDB
Position
complement(2956987..2959269)
AA seq 760 aa
MTEDESDPFDAIVDAPFDAALSERYLVYALSTITARSLPDLRDGLKPVHRRLLWAMRQLK
LDPASAYKKSARVVGDVIGKYHPHGDASVYDAMVRLAQDFSLRYPLVEGQGNFGNIDGDN
AAAYRYTEARLTRTAIQLMSGLDEGTVDFVPTYNGEESEPEIFPGLFPNLLANGATGIAV
GMATSIPSHNVAEIIDATLLLIDNPHAEHDQLMEVFHGPDFATGGLVVDSPAAISHAYET
GKGAFRMRGRFSTGKDEDDNWEDTGIEKLGSGQWQLVISEIPYMLAKGKLIEQVAQLIAD
KKLPILEDIRDESDEQIRIVFVPKSRNVDPELLKESLYRLTDLESKFSLNLNVLDSHRTP
GVMGLKLLLQEWVYSQIDILLRRTRHRLDKIASRLELVEGYIIAYLNLDRIIEIIRTEDE
PKPLMMAEFNLTDRQAEAILNMRLRSLRKLEEMELRQERDDLLKEQEDLQKLLDSPARQR
TRLKRDLTTLRKDYAETTVLGRRRTTIAQARPTVEFSMDAMIEKEPVTVILSQRGWIRAA
KGHVALDGDFKFKEGDGPAFAFHAQTTDKILIGVDNGRFYTLGADKLPGARGFGEPIRTM
VDIDADAHIIAAFTHRPKAQLLLASTIGRGFAAESDEILAETRKGRAVMTTKPGVKLAVV
REIPPEHDHVAVVGENRKLVIFSLEELPVLAKGQGVTLQRYRDGGMSDVTTLRLEDGLSW
TMGGDTGRTRTEKEMVMWKVARGAAGRLPPNGFPRDNKFQ
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgacagaagacgaatccgatcccttcgacgccatcgtcgatgcgcctttcgacgccgct
ctgtccgagcgttatctcgtctacgccctgtccacgattacagcgcgttcgctgccggat
ctcagggacggtctcaagccggtccatcgccgcctgctctgggcaatgcgccagctcaag
ctcgatccggcgagtgcctacaagaagtcggcccgcgtcgtcggcgatgtcatcggtaaa
taccatccccatggcgatgcctcggtctatgacgccatggtccgcctcgcgcaggacttt
tcgctgcgctacccactggtcgaggggcagggcaacttcggcaatatcgacggcgataac
gcggcggcctatcgctacaccgaagcgcgcctgacgcgcactgcgatccagctcatgtcg
gggctggacgagggcacggtcgatttcgttcccacctataacggtgaagagagcgagccg
gagatcttccccggcctgttcccgaacctgctggccaacggtgccaccggtatcgcggtg
ggcatggcgacttcgattccgagccacaatgtggccgagatcatcgatgccaccttgctc
ctgatcgataacccccatgccgaacacgaccagctcatggaagtgttccatggcccggat
ttcgccaccggcggccttgtggtcgatagtcccgcagcgatttcccatgcctatgaaacc
ggcaagggtgccttccggatgcgcggtcgcttctcgaccggcaaggacgaggacgacaac
tgggaagacacgggaatagagaagctgggcagcgggcagtggcagctcgtcatcagcgaa
attccctatatgctcgccaaggggaagctgatcgagcaggtcgcgcagctcatcgccgac
aagaaactgccgatcctcgaggatatccgcgacgagagcgacgagcagatccgcatcgtc
ttcgtgcccaagagccgcaacgtcgatcccgagctgctgaaggagagcctctacaggctc
accgacctcgaatcgaagttcagtctcaatctcaacgtgctggattcacaccggactccg
ggcgtcatggggctcaaactgctgttgcaggagtgggtctacagccagatcgacatcctg
ctgcggcgcacccgccaccgcctcgacaagatcgcctcgcggcttgagctcgtcgagggt
tacatcatcgcctatctcaacctcgaccggatcatcgagatcatccggaccgaggacgag
cccaagccgttgatgatggccgagttcaacctcaccgaccggcaggccgaggcgatcctc
aacatgcgcctgcgctccttgcgcaagcttgaggaaatggagctgcggcaggaacgcgat
gacctgctcaaggagcaggaagatctgcagaagctgctcgacagtccggcgcgccagcgc
acccggctcaagcgggacctgacgacgctgcgcaaggactacgccgagaccacggtgctc
ggtcgccgccgcaccaccatcgcgcaggcgaggcccacggtcgaattctcgatggacgcg
atgatcgagaaggagccggtgaccgtgatcctttcgcagcgcggctggatccgtgcggcg
aaaggccacgtcgcgctggatggcgacttcaagttcaaggaaggcgacggccccgctttc
gcctttcatgcgcagacgaccgacaagatcctcatcggggtcgacaacggccgcttctat
acgctcggagcggacaagctgcccggcgcacgcggtttcggtgaaccgatccgcacgatg
gtggacatcgatgccgatgcccacatcatcgctgccttcacgcatcgccccaaggcgcag
ctgctgctggcctcgaccatcggtcgcggatttgcggcagaatccgacgagatcctggcc
gagacgcgcaagggacgtgcagtgatgacgaccaagccgggggtgaagctggcggtcgtg
cgcgagatcccgccagagcacgaccacgtcgcggtcgtcggcgagaaccgcaagctggtg
atcttcagtctcgaggaactgccggtcctggccaagggacagggcgtgacgctgcagcgc
taccgcgacggcggcatgtccgacgtgacgacgctcaggctcgaggacggcctgtcctgg
acgatgggcggcgatacggggcgcacgcgcacggaaaaggaaatggtgatgtggaaggtc
gcgcgcggtgcggccggacgcctgccgcccaacggcttcccgcgcgacaacaagttccag
taa

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