Novosphingobium sp. PP1Y: PP1Y_AT29672
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Entry
PP1Y_AT29672 CDS
T01515
Name
(GenBank) propionyl-CoA carboxylase alpha chain
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00280
Valine, leucine and isoleucine degradation
npp00630
Glyoxylate and dicarboxylate metabolism
npp00640
Propanoate metabolism
npp01100
Metabolic pathways
npp01110
Biosynthesis of secondary metabolites
npp01120
Microbial metabolism in diverse environments
npp01200
Carbon metabolism
Module
npp_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PP1Y_AT29672
00640 Propanoate metabolism
PP1Y_AT29672
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PP1Y_AT29672
Enzymes [BR:
npp01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
PP1Y_AT29672
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
ATP-grasp_5
DUF2118
QRPTase_N
GCV_H
RnfC_N
PylC-like_N
Motif
Other DBs
NCBI-ProteinID:
CCA93732
LinkDB
All DBs
Position
complement(3115930..3117951)
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AA seq
673 aa
AA seq
DB search
MFKKILIANRGEIACRVIKTARRMGIQTVAVYSDADARAPFVQMADEAVHIGPAPAAQSY
LIAEKIIEACKQTGAEAVHPGYGFLSERTAFAEALAAEGIEFIGPPVNAIAAMGDKIESK
KLAKEAGVNVVPGYVGEIEDTEHAVQISNDIGYPVMMKASAGGGGKGMRLAYSEKDVREG
FESVKREGLNSFGDDRVFIEKFILNPRHIEIQILGDKHGNILYLNERECSIQRRHQKVVE
EAPSPFVTEKMRKAMGEQCVALSRAVGYYSAGTVELIVSGADPSGESFYFLEMNTRLQVE
HPVTEAITGVDLVEQMIRVAAGEKLEMTQDDVKIDGWAIENRVYAEDPYRGFLPSTGRLV
RYQPPVDGWTDDGAENGRRGIDGIRVDDGVYEGGEVSMFYDPMIAKLITWGKTRDEAADK
QIAALDAFEIEGLGHNIDFVSAIMQHPRFRSGELTTGFIAEEYPEGFTGAATSEELKVKL
AAVAGFVATARSDRSRRISGQLADPTDPPADWTVTIDKTDYVVVLDEDVVTVNGEEVELA
LEYTPGDRLVEAEVDGEDLGIKLEVTRTGFKMTTRGAIHKVDCLPTRVAYLSQHMIEKIP
PDLSKFLICPMPGLLVALNVSEGEKVEAGQPLAVIEAMKMENILRAEKAGVVKSVNAKAG
ESLAVDAVILEME
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaagatcctcatcgctaaccggggcgagatcgcctgccgtgtcatcaagacc
gcgcgccgcatgggcatccagacggtcgccgtctattccgatgccgatgcccgcgcgcca
ttcgtgcagatggccgatgaggcagtgcatatcggtccggcgcctgccgcgcagtcttac
ctgatcgcagagaagatcatcgaggcctgcaagcagaccggcgccgaagcggttcacccg
ggctacggcttcctctccgagcgcacggccttcgccgaggcgctggctgcggaaggcatc
gagttcatcggcccgcccgtgaacgcgattgccgcgatgggcgacaagatcgagtccaag
aagctcgcaaaggaagccggcgtcaacgtcgtgcccggctacgtcggcgagatcgaggac
accgagcacgcggtgcagatctccaacgacatcggctacccggtgatgatgaaggcttcg
gccggcggcggcggcaagggcatgcggctggcctattccgagaaggacgtccgcgagggc
ttcgagtccgtcaagcgcgagggcctcaactccttcggtgacgaccgcgtcttcatcgag
aagttcattctcaatccgcgccacatcgagatccagatcctcggcgacaagcacggcaac
atcctttacctgaacgagcgcgagtgctcgatccagcgtcgccaccagaaggtggtcgag
gaagcgccgtcgcccttcgtcaccgagaagatgcgcaaggccatgggcgaacagtgcgtc
gcgctgtccagagccgtgggctactactcggcgggcacggtcgagctgatcgtctcaggc
gccgacccgagcggcgagagtttctacttcctcgagatgaacacccgcctgcaggtggag
cacccggtcaccgaagcgattaccggggtcgacctcgtcgagcagatgatccgcgtcgct
gccggcgagaagctggagatgacgcaggatgacgtgaagatcgacggctgggccatcgag
aaccgcgtctatgccgaagatccctatcgcggcttcctgccctcgaccggtcgcctcgtg
cgctatcagccgccggtggatggctggaccgatgacggtgcggagaacgggcgccgcggt
atcgatggcattcgcgtcgacgacggcgtctacgagggcggcgaggtctcgatgttctac
gacccgatgatcgccaagctgatcacctggggcaagacccgcgatgaggccgccgacaag
cagatcgccgcgctcgacgccttcgagatcgaaggtctcggccacaatatcgacttcgtc
tcggcgatcatgcagcacccgcgcttccgctcgggcgagctgaccaccggcttcatcgcc
gaggaatatcccgagggtttcaccggcgcggcgacgtcggaagaactgaaggtgaagctt
gccgccgtggccggcttcgtcgcgactgcgcgctcggaccgctcgcgccgcatctccggc
cagcttgccgatccgaccgatccgccggccgactggacagtgaccatcgacaagaccgac
tacgtggtcgtgcttgacgaggatgtggtgacggtgaacggcgaggaagtcgaactcgcg
ctcgagtacacgccgggcgaccgcctggtcgaagccgaagtcgacggcgaggaccttggc
atcaagctcgaagttacccgcaccggcttcaagatgaccacgcgcggcgcaatccacaag
gtcgactgcctgccgacccgcgtggcctatctgtcgcagcacatgatcgaaaagatcccg
ccggatctttccaagttcctcatctgcccgatgccgggcctgctcgtcgcgctgaacgtg
agcgagggcgagaaggtcgaagccggccagccgctcgcggtgatcgaggcgatgaagatg
gaaaacatcctgcgcgccgagaaagcgggcgtggtgaagtcggtcaatgccaaggccggc
gaaagcctcgcggtcgacgccgtcattctcgagatggagtga
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