Novosphingobium sp. PP1Y: PP1Y_AT30022
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Entry
PP1Y_AT30022 CDS
T01515
Name
(GenBank) (uracil-5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npp03009
]
PP1Y_AT30022
Enzymes [BR:
npp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PP1Y_AT30022
Ribosome biogenesis [BR:
npp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PP1Y_AT30022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Motif
Other DBs
NCBI-ProteinID:
CCA93763
UniProt:
F6IGR9
LinkDB
All DBs
Position
complement(3155596..3156957)
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AA seq
453 aa
AA seq
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MAPRRGCAALSAGFHCRTACREDTGCASGLSVSETEEILRIASKGDGVTASGRFAWGAAP
GDMLHEDGTLEWGPHHVEPPCRHFGRCGGCQLQQLDEESLAAFVEARVANASVSQELGAE
TITPPHLSPPMSRRRVSLRAESSGGRIVVGFREARSHRLVELEECHVMALELAALLAPLR
KLLITMGKGAPKPKKGGKQGKRQEKGGAMPRMAADIEMTLVEQGVDLGVKGLATEGLAAT
EAMLDFARDHGLARLTMDGGYGHEVVWEPEPVTVKLGEVSVPFPPGSFLQATQDGEETLV
GAAWEWLAGMPTVADLFSGLGTFAFALAGPDRKVLAAEAARDAHLACKAAADRSQQPVFA
VHRDLFRNPLQADELGKFAAVLLDPPRAGAREQVDCIAESSVGRVVYVSCNPSSWSRDAA
RLIEAGFRLVELRPVGQFRWSTHVELASLFVRD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggctccacggcgaggctgcgcggctttgtccgccggctttcactgccggacagcttgc
cgagaggataccggctgcgctagcggcctgtctgtgagcgaaaccgaagaaatcctgcgc
atcgcctccaagggcgatggcgtaaccgcaagtggccgatttgcctggggcgccgccccg
ggggacatgctgcacgaggacggcaccctggaatgggggccgcatcacgtggagccgccc
tgccgccatttcggccgctgcggtggctgccagttgcagcagctagacgaggagagcctt
gcagccttcgtcgaggcgcgcgtggccaatgcctcggtttcgcaggagctgggcgccgag
acgatcacgccgccgcatctctcgccgccgatgagccgccgccgcgtctcgctgcgggcg
gaaagttcgggaggccgcatcgtcgtcggcttccgcgaggcgcgttcgcaccggctggtc
gagcttgaggaatgccatgtgatggcgctcgagctggcggcgctgctggcgcccttgcgc
aagctgctgatcacgatgggcaagggcgcgcccaagccgaagaagggcggaaagcagggc
aagcgccaggaaaagggtggcgcaatgccgcgcatggccgccgacatcgaaatgaccctg
gtcgagcagggcgtcgacctgggggtaaagggcctggccacggaagggctagcggcgacc
gaggccatgctggacttcgcgcgcgaccacggtcttgcgcgccttaccatggatggcggc
tacggccacgaagtggtctgggagcctgaaccggtcacggtgaagctgggcgaagtctcg
gtgccgtttccgccgggcagcttcctgcaggcgacgcaagacggcgaggaaacgctggtc
ggcgcggcctgggaatggctcgccgggatgccgacggttgcggatcttttctccgggctg
ggcacattcgccttcgcgctggcgggaccggataggaaagtgctggccgcagaggccgcg
cgcgatgcgcatctggcctgcaaggccgccgcagaccgctcacagcagccggtttttgcc
gtccaccgcgacctgttccgcaatccgctgcaggcagacgaattgggcaagttcgcggcg
gttctcctcgatccgccacgcgccggcgcgcgagagcaggtggactgcatcgccgaatcg
agcgtggggcgggtggtctatgtttcctgcaacccgtcgagctggtcacgcgatgcggcg
cggttgatcgaggcggggttccgcctcgtcgaactgcgcccggtaggccagttccgctgg
tcgacgcatgtcgagctggcgagcctgttcgttagggactga
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