Novosphingobium sp. PP1Y: PP1Y_AT30103
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Entry
PP1Y_AT30103 CDS
T01515
Name
(GenBank) conserved hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PP1Y_AT30103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT30103
Enzymes [BR:
npp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PP1Y_AT30103
DNA repair and recombination proteins [BR:
npp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PP1Y_AT30103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CCA93771
UniProt:
F6IGS7
LinkDB
All DBs
Position
3164648..3165403
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AA seq
251 aa
AA seq
DB search
MVQATNTQFLDDIAGALDWWRDAGVDYAFLDEPRQWLTPPEDEDADSTGPRRPRRTPVEQ
VEATPPPSRFDPAALPGDLAAFGQWWLSEPLLDDGSTEGRMLPQGQAGAKLMVVVDMPEP
EDSQALLGGPQGRLLDAMLAAFGTRREDIYLASALPRATPAPDWAAMNERGLGQVLVHHV
NLVAPERLILLGTNVLPLIGHELPQRSAVLHTFHHEGGTIPLLASRGLPALLAQPRWKAV
LWQAWLKWTTG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggttcaagccacgaatacgcaatttctggacgatatcgcaggtgcactggactggtgg
cgcgatgcgggggtggactatgccttcctcgacgagccgcgccagtggctgaccccgcct
gaggacgaagacgccgattccaccggaccgcggcgtccccggcgcacaccggtcgaacag
gtggaagcaacgccgccgcccagccgcttcgatcctgcagcgctgcccggcgacctcgcc
gccttcggccagtggtggcttagcgaaccgctgctcgacgatggctccaccgagggcagg
atgctgccacagggccaggcgggcgcgaaactgatggtcgttgtcgacatgccggaaccc
gaagacagccaggcgctgctcggcggaccgcaaggcagactgctcgatgccatgttggcc
gccttcggcacgcgccgcgaggacatctaccttgcaagcgccctgccccgcgcgacaccg
gcgcccgactgggcagcgatgaacgagcgcgggctcggccaggtgcttgtccatcatgtc
aatctggtggcgccggaacggcttatcctactgggaacaaacgtcctgccgctcattggg
cacgaattgccgcaacgctctgccgttttacacacattccatcatgaaggaggaacgata
cctctgcttgcttcgagggggctacctgcattgctggcgcagccgcgatggaaagccgtt
ctctggcaggcttggctcaagtggacgaccggctga
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