Novosphingobium sp. PP1Y: PP1Y_AT30117
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Entry
PP1Y_AT30117 CDS
T01515
Name
(GenBank) lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
npp01011
]
PP1Y_AT30117
Enzymes [BR:
npp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PP1Y_AT30117
Peptidoglycan biosynthesis and degradation proteins [BR:
npp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PP1Y_AT30117
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_16
SLT_2
Motif
Other DBs
NCBI-ProteinID:
CCA93772
UniProt:
F6IGS8
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Position
3165473..3167287
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AA seq
604 aa
AA seq
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MIERSGKRILTKLAKAGWIAGLAIACTATVATAPAYANSAAVDYFRTRADRTAVPSLLSQ
DDRAYYKQVFDAIDAKNWSKVQQMLAERPDGPLHQQARAEYYLAAGSPKIELPDLQDWLA
KGTQLPGADQISRLALKRGAEAIPDLPTEQQFARLPSMPKRTRPSSINDGTMPEAISSGI
LDRIKNDDPMGARVLLDGIDAGLSNSARAEWRQRVAWSFFIENQDASAYQMAQLATLGTG
PWVGEAWWTAGLAAWRLGDCDAAGDAFAKAAKTSENAELTSASYYWQSRALVRCRRPDLA
AEPLRMAAKRDETLYGMLASEQLGVHLPEQHAGADFTQADWQSLRNNTNVRAAVELAEIG
EDGLADEVLRHQARIGDPGQYEPLSRLARDLGLPSTQLWMAYNAPRGGKPEPATRFPTPK
WTPIGGWKVDPALVYAHALQESIFQASVVSPAGARGLMQIMPSAARDHASDIGVSGSASD
LNKPEINLAFGQRHLEMLKSASGTQGLLPKVMAAYNAGLAPVTRWNTEINDNGDPLLWME
SIPYWETRGYVNIVLRNYWMYERQAGGVSESRVALAQDMWPTFPELAGSKGVRMAANGAI
LRGH
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaacgatcggggaagcgaattttgactaaacttgccaaggcaggatggatcgcc
ggactcgccatcgcgtgcaccgcgaccgtggcgaccgctcctgcatatgcgaacagtgcc
gccgtcgactatttccgcacccgcgcggaccgcactgccgtgccttcgctgctgagccag
gatgatcgcgcctattacaagcaggtgttcgacgcgatcgacgccaagaactggtccaag
gtccagcagatgctggccgagcggcccgacggcccgctgcaccagcaggcccgcgcggaa
tactatcttgccgccggttcgcccaagatcgagctgcccgacctgcaggactggctggcc
aagggcacgcagcttcccggcgccgaccagatttcccgccttgccctgaagcgcggggcg
gaggcgattcccgacctgccgaccgagcagcagttcgcccgcctgccctcgatgcccaag
cgcacccgtccctcctcgatcaacgacggcacgatgcccgaggcaatttcttccggcatc
ctcgaccgcatcaagaacgacgacccgatgggcgcgcgagtcctgctcgacgggatcgac
gccgggctgagcaattcggcgcgcgccgagtggcgccagcgcgtcgcctggagcttcttt
atcgagaaccaggacgcctcggcctaccagatggcgcagttggcaaccctcggtaccggc
ccctgggttggcgaggcatggtggacggcaggcctcgccgcatggcgcctgggcgattgc
gatgccgccggcgacgcctttgccaaggccgcgaaaacgtccgagaacgcggaactgact
tctgcatcctattactggcagagccgcgccctcgtgcgctgccgccgcccggacctcgcc
gcagaacccctgcgcatggcggccaagcgcgacgagacgctttacggcatgttggcgagc
gaacagctcggcgtgcacttgcccgaacagcatgcaggtgcggactttacccaggccgac
tggcaatcgctgcgcaacaacaccaatgtgcgcgcggccgtggaactcgccgagatcggc
gaggacggccttgccgacgaagtgctgcgccatcaggcccgcatcggcgatcccggccag
tacgaaccgctctcacgcctcgcccgcgaccttggtctgccttcgacgcaattgtggatg
gcctacaatgccccgcgcggcggcaagcccgaaccggcgacccgtttccccactcccaag
tggacgcccatcggcggctggaaagtcgatccggcgctggtctatgcccatgcgctccag
gaatccatcttccaggccagcgtcgtcagccccgccggtgcgcgcggcctgatgcagatc
atgccttccgccgcacgcgatcatgcctcggacatcggcgtgtcgggatcggccagcgac
ctcaacaagcccgagatcaatctcgccttcggccagcggcacctcgaaatgctgaagagt
gcgtcgggaacgcagggcctgctacccaaggtcatggcggcctataacgccggtctcgct
ccggtcacgcgctggaataccgagatcaatgacaacggcgatccgctgctctggatggaa
tcgatcccttactgggaaacccgcgggtacgtgaacattgtcctgcgcaattactggatg
tacgagcgccaggcgggcggcgtttcggaaagccgggtggcgcttgcccaggacatgtgg
ccgactttcccggaactggccggatcgaagggcgtacgcatggcagcgaacggagcgatc
ttgcgtggccattga
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