Novosphingobium sp. PP1Y: PP1Y_AT31726
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Entry
PP1Y_AT31726 CDS
T01515
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT31726
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT31726
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
CCA93928
LinkDB
All DBs
Position
3333815..3335986
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AA seq
723 aa
AA seq
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MKRFKVRLFATATVVLAQSLFSSVVQAQDTAAAQPEDEQATTGIEDIVVTATRREARLQQ
VPVAVTAIGGDALQSADVSTVRTLTQVVPGFVGSRNMGVFQPVVRGVGSTGISIGDEPNI
ATYIDGVYQPESAANWIDLVEVERVEVLRGPQGTTFGRNATGGLINVITPDPSFDFRGKA
SLRVGRMRREAGDYDARLYVTGPISEKAAIDLSALFRKNDGYIDDLVRGGTLGDQRVIDL
RSKVLFKPADNFKVVLTGEFFDQQSTTNSPQPVDGNTAGRRFTGVILPTGPWQASLTEVP
LLNLRRWTFALHTKLDLGAVNLETTSGFLNLRWTQTTDSDASNLRLGNFPAIFNAESGSQ
EIKLSSANPGPFQWLVGGYFYQFGGSSFLQPWTAANPTLPLAGPTLEPDLGGRSFAGFAD
VTYEATPGLFVNLGGRYTTEKREFSQTVNGNLVVNNVDKTFNKFNYKVGLRYEINNTTNV
YASWSTAFKSGVYNMASTRSVPVEPEEIKAAEFGIKSDPFNWLRVNLATYYYDYKNLQLQ
SKDNLGAGYILQNAANAEIYGGELELTVAPTSDLKLRGALAYTHARYKDFIAAQGFISRV
DGGNTVVTLDASGNVMTRAPEWSGNVGFDWGHDLAGGRLSLNGNLSFSSRLYYDFANNFS
QKAYSLTNLSASWTPESENWKFSIWATNLTNEKVFQTMRPGALSNDGFYEQPRKVGATVE
VKF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggttcaaagtacgcttgttcgcaactgcaacggtcgttctggcgcagtcgctt
ttttcttcggtcgtacaagcccaggatacagcggccgcccaacccgaggacgagcaggca
acgaccggtatcgaagatatcgtcgttaccgcaacccgccgcgaagcaagactgcagcaa
gtgccggtggcagtgacggcaatcggcggcgatgccctgcaatcggccgacgtctcgacc
gtccgcacgctgacccaggtcgtccccggctttgtcggcagccgcaacatgggcgtgttc
caaccagtggttcgcggcgtcggttcgaccggcatctcgatcggcgacgaacccaacatc
gccacctatatcgatggtgtttatcagcccgaatccgccgcgaactggatcgatcttgtc
gaggtcgagcgggtcgaagtactgcgcggtccgcagggcaccacctttggccgcaacgcg
accggcgggctgatcaatgtcatcacccccgatccgagcttcgatttccgcggcaaggct
tcgctgcgggtggggcgcatgcggcgcgaggccggtgattatgatgcccggctctatgta
accgggccaatcagcgagaaggccgcgatcgacctgtcggcgctgttccgcaagaacgat
ggctatatcgacgatctggttcgcggcggcacccttggcgaccagcgggtcatcgatctg
cgcagcaaggttctgttcaagccggccgacaatttcaaggtagtcctgaccggtgaattc
ttcgaccagcagagcacgaccaattcaccccagccggtcgatggcaacaccgccgggcgc
cgcttcaccggcgtcattctgcccaccggcccgtggcaggcgtcgttgaccgaggttccc
ctgctgaacctgcggcgctggacattcgccctgcacaccaaactcgatctgggcgcagtc
aacctggaaaccaccagcggtttcctgaacctgcgctggacccagaccaccgattcggac
gcgtcgaacctgcgtcttggaaactttccggccatcttcaacgcagaatcaggcagccag
gaaatcaagctcagttcggcgaaccccgggccatttcaatggctggtgggcggctatttt
taccagttcgggggcagctctttcctccaaccatggacggccgcgaatcccaccctcccc
ctcgccgggccgactctcgaaccggacctcggcggccgctccttcgcgggttttgccgac
gtgacctatgaggccacgcccggcctgttcgtcaatctcggcggtcgttacaccacggaa
aagcgtgaattctcgcagacggtgaatggcaacctggtcgtcaacaacgtcgacaagacg
ttcaacaagttcaattacaaggttggccttcgttacgaaatcaacaacaccacgaacgtc
tatgcgagctggagcaccgctttcaagagcggtgtctacaacatggccagtacccgcagc
gtgccggtcgagcctgaagagatcaaggccgccgaattcgggatcaagtcggacccgttc
aattggctgcgggtcaaccttgcgacatattactacgactacaagaaccttcagcttcag
tcgaaggataacctcggagcgggttacatcctccagaatgctgccaatgcggaaatctat
ggcggcgaactggaattgaccgtggcaccgaccagcgatctgaagctgcgcggcgccctg
gcctatacccacgctcgctacaaggatttcatcgcggcgcagggctttatctcgcgggtt
gacggcggaaataccgtcgtgacgctggatgcctcgggcaacgtcatgacccgggcgccc
gagtggtccggtaatgtcggttttgactgggggcacgacctggcgggtggccgcctgtcg
ctcaacggcaatctttcgttcagctcgcgcctctactacgatttcgccaacaacttctcg
cagaaagcctactcgctgaccaacctgtcggcttcctggacgcccgagagcgagaactgg
aagttctcgatttgggcgaccaacctgaccaacgagaaggtcttccagacgatgcgtcct
ggcgccctttcgaacgacggtttctacgaacagccgcgcaaagttggcgcgacggtcgaa
gtcaagttttaa
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