Novosphingobium sp. PP1Y: PP1Y_AT33003
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Entry
PP1Y_AT33003 CDS
T01515
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT33003
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT33003
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
CCA94029
LinkDB
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Position
3456244..3458688
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AA seq
814 aa
AA seq
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MNVLHRSVSALAICTTMVLPQIAVAQESNAQAPLGGLEEIVVTAQRVSQSAQKAPLPVDV
VTSADLRQQIVTRAEDLSRTSPALATVGGAGGTTTFYVRGVGNNTVNAYSDPAIAFNYDG
VYIGRPSSTSGMFYDLARVEVLKGPQGTLYGRNATGGAINVIPNKPRLGEVGADATIGYG
NYNWWTAQAAVNVPAGEAVAMRLAGTLSRHDAFMSDGTGNQREYGARFQIYAEPDPQLDL
RIAADYAHQGGASSSSYYVGSVDPTFGPNGFAGYEYTRSGFSSLQGLGDPASQAYLASRY
IPQVGRAGAVSDGTPSNDNDYWGVTAELNYKTDIGTLTIQPAWREAHIDYRFANIFREGG
SKEDDRQASIEARWAGQASPQIDYLLGGIYFDEKIGATAYYNQWTLSPFQQFDTHTKSWA
GFGKVTFRPVERLSLTAAGRYTSDRKSFDGTSNVYILFCGNPALGNSCPTLPFMPLATSG
AEVESFYGAAGIPVTSVPLFVLPDAIGGSQTAPFVLRSPIVINSSLKDNKFTYRLAAQYD
FSPSNMVYASFETGYHAGGFSFARGLDSYEPETLDAYTLGSKNRFLGNRLQLNVEAFLWK
YRNQQFSQFGYDLGDPPSTVLLTRNIGTSTIKGVDLDVEFQATPDTLLSGSVQYLDTKYD
SFVYYAPNQGLPPKTACGYSPTTQTTPGGSVVNVFEIDCSGRQAFNAPRWSFTVNGEQTV
PLGDLKLVLQAGTRYRSSTYFSADYLPFLKSKSNFVTTLSATLAEASDRWSITAYAFNVT
DSRRLVNGVINSADLYVADAEQPRTYGLRASFHY
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcttacatcgtagcgtgtctgcacttgcgatttgcacgaccatggtgctgccg
cagattgctgtcgcgcaggagagcaatgcacaggctccactaggaggtctggaggagatc
gtggtcactgcccagcgcgtcagccagagcgctcaaaaggcgcccttgccggtcgatgtg
gtaacgagcgcggaccttcgtcagcagatcgtgacgcgggcggaggacttgtcccgcacc
tctccggcgctcgccaccgtcggcggcgcgggcggcacgactactttctatgtgcgcggc
gtcggcaacaacacggtgaacgcctattctgacccggcaatcgcgttcaactacgatggg
gtctatatcggccgccccagctccacctccggcatgttctacgatctcgcacgggtcgaa
gtgctcaaggggccgcaaggtacgctctacggccgcaatgcgaccggcggcgcgataaac
gtgatccctaacaagccgcgcctcggcgaggtcggcgccgacgccactatcggctatggc
aactacaactggtggaccgcccaagccgcggtcaatgtcccagcgggcgaagcggtggcc
atgcgattggcgggtacgctgtcccggcacgacgcgttcatgagcgatggcaccggcaac
cagcgggaatatggtgctcgcttccagatctatgccgagcctgacccgcaactggatctg
cgcattgccgccgactatgcccatcagggcggcgccagttcctcgagctattatgtcggc
tccgtggatccgaccttcggtccgaacggatttgccggctacgaatacacgcgatcgggc
ttctcgagcctgcaaggcctgggcgatccggcatcccaggcatacctcgcctcacggtac
atcccgcaagtcggtcgcgcaggtgcggtaagcgatggcacgccgtcgaacgacaacgac
tactggggcgtgacggcggaactcaactacaagaccgatatcggcaccctgacaatccag
cccgcctggcgcgaggcgcacatcgattaccgcttcgccaacatattccgcgagggcggc
tcgaaggaagacgatcgtcaggcaagcatcgaggcgcgctgggcgggacaggccagccct
cagatcgactacctgcttggcggcatatatttcgatgagaagatcggcgccacggcctac
tataaccagtggacgctttcgcccttccaacagttcgatacgcacaccaaatcctgggcg
ggcttcggcaaagtcacctttcgtcccgtcgaacggctgagcctgacggcagcgggacgc
tatacatcggatcgcaagtccttcgacggcacctcgaacgtctatatcctgttctgcggc
aatcctgcattgggcaatagctgtccgacgctgccgttcatgccgctcgcaaccagcggc
gctgaggtcgagagcttctatggcgcggcaggtatcccggtcacgtcagttccgctcttc
gtcttgcccgatgccatcggcggttcccaaacggcgccattcgtgttgcgctcgcccatc
gtcatcaattcgtccctgaaggacaacaagttcacctaccgacttgcggcgcagtacgat
ttttcgcccagcaacatggtctatgcgagcttcgaaaccggctatcatgcaggcggattc
tcgtttgcgcgggggctggacagctatgaacccgaaacgctcgacgcctatacgctcggt
tcgaagaaccgcttccttggcaatcgcctgcagctgaatgtcgaggcgttcctctggaaa
tatcgcaaccagcaattcagccagttcggatacgatctgggcgatccgccctcgaccgtg
ctgctgacccggaacatcggcaccagtacgatcaagggcgtcgatctcgatgttgagttc
caggcaacgcccgatacgctgctttccggtagcgtccaatatctggacacgaaatacgac
agcttcgtctattatgcgccgaatcagggcctgccgcccaagacggcctgcggctacagc
ccaacgacgcaaaccacgcctggcggttccgtagtcaacgtcttcgagatcgattgctcg
ggacggcaggccttcaacgcgccgcggtggtccttcacggtcaacggcgaacagaccgtg
ccgctcggcgacctcaagctcgtgctgcaggccggaacgcgctaccgcagttccacctac
ttcagtgccgattacctgcctttcctcaagagcaagagcaatttcgtcaccacactgtcc
gccaccctggccgaggcaagcgatcggtggtcgatcacagcttacgcattcaatgtcacg
gacagtcggcgcctggtgaacggggttatcaacagcgccgacctatacgtagccgatgcc
gaacagccgcgcacttacggacttcgcgccagcttccactattga
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