Novosphingobium sp. PP1Y: PP1Y_AT33926
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Entry
PP1Y_AT33926 CDS
T01515
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00300
Lysine biosynthesis
npp01100
Metabolic pathways
npp01120
Microbial metabolism in diverse environments
npp01230
Biosynthesis of amino acids
Module
npp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PP1Y_AT33926
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
npp01002
]
PP1Y_AT33926
Enzymes [BR:
npp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PP1Y_AT33926
Peptidases and inhibitors [BR:
npp01002
]
Metallo peptidases
Family M20
PP1Y_AT33926
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
CCA94113
UniProt:
F6IIP5
LinkDB
All DBs
Position
complement(3551747..3552892)
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AA seq
381 aa
AA seq
DB search
MSQTAPSTASVAELAEALIACPSVTPAAGMVFDCLEGQLKPLGFEVVRFVAGEAPDGPVE
NLFAIRKGPEGSRHFAFAGHLDVVPPGEGWTSAPFMPERRGELLYGRGAVDMKGSIAAMV
AAVGEIPQDAGTISFVITGDEEGPARFGTVALIELMRERGDIPDLCLVGEPTSVNRLGDM
MKIGRRGSVNIFLEVEGTQGHVAYPHLAHNPITPLVAMLAELNALLLDEGTDWFQASNLE
VTDITVGNPAHNVIPAKAMARISIRFNDLHTGAELGARVTEIAEKHGGTARPVISGEAFL
TEPGAFSDLLADAIRAETGVEPELSTSGGTSDARFLKNISPVIEFGLCNATMHKRDEAVA
LEDLEVLARIYRRTVQNALKA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaccgcgccttccactgcaagcgttgccgagcttgccgaagccctgattgcc
tgccccagcgtcacccctgccgcggggatggtgttcgactgtctcgaaggccagctcaag
ccgctcggcttcgaagtcgtgcgcttcgtcgcgggggaggcgccggacggtccggtcgag
aacctcttcgcgatccgcaaggggccggaaggttcgcgtcacttcgccttcgccgggcat
ctcgatgtcgttccgccgggcgagggctggacgagcgcgcccttcatgcccgagcgacgc
ggcgagctgctctatggccgcggggccgtcgacatgaagggctcgattgcggcgatggtc
gcggccgtgggtgaaattccgcaggatgcgggcacgatcagctttgtcattactggcgac
gaggaaggcccggcgcgtttcggcaccgttgcgttgatcgagctgatgcgcgagcgtggc
gacattcccgacttgtgccttgtcggcgagccgacgtccgtcaatcgtctcggcgacatg
atgaagatcggtcgccgcggctcggtgaatatcttcctcgaggtcgaagggacgcagggc
cacgtcgcctatccgcacctcgcccataacccgatcacgccgctcgtcgcgatgctggcc
gaactcaacgcgctgctgcttgacgaggggaccgactggttccaggcctcgaacctcgaa
gtgaccgacatcaccgtcggcaatcccgcgcacaacgtgattcccgccaaggcgatggcg
cgcatctcgatccgcttcaacgacctgcatacgggcgcggagctgggcgcgcgcgtgacg
gagattgccgagaagcacggcggcaccgcccgcccggtgatctctggcgaggcattcctg
accgagccgggcgcgttctccgacctccttgccgacgcgatccgcgcagagaccggcgtc
gaaccggaactgtcgaccagcggcgggacgtccgacgcgcgcttcctcaagaacatttcg
ccggtcatcgaattcggcctgtgcaacgcgacgatgcacaagcgcgacgaggccgtggca
ctggaagatctcgaggttctggcccggatctatcgaaggacggtacaaaacgccctgaag
gcttga
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