Novosphingobium sp. PP1Y: PP1Y_AT34430
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Entry
PP1Y_AT34430 CDS
T01515
Name
(GenBank) two component system, response regulator FlrC
KO
K10943
two-component system, response regulator FlrC
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp02020
Two-component system
npp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP1Y_AT34430
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PP1Y_AT34430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
npp02022
]
PP1Y_AT34430
02035 Bacterial motility proteins [BR:
npp02035
]
PP1Y_AT34430
Two-component system [BR:
npp02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
PP1Y_AT34430
Bacterial motility proteins [BR:
npp02035
]
Flagellar system
Flagellar assembly proteins
Others
PP1Y_AT34430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_3
HTH_20
MCM
Mg_chelatase
HTH_28
AAA_7
AAA
HTH_23
AAA_16
HTH_29
AAA_19
MCM_lid
MerR
HTH_11
HTH_24
AAA_2
Motif
Other DBs
NCBI-ProteinID:
CCA94165
UniProt:
F6IIU7
LinkDB
All DBs
Position
3606087..3607325
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AA seq
412 aa
AA seq
DB search
MAIATSLLDLGAIDLRDAADEAPGRPRTRSVQLSRGTAPAFGRKGASQIALTYVDPVSEA
SLAMLLAAMAGADEPIAADPESLSVFALADRLANSDIPVLINGPTGTGKEVLSRFIHARS
PRREGPFIAVNCAAMPETMLEAMLFGHQKGAFTGATQASEGFIRAADGGTLLLDEIAEMP
LQLQAKLLRALQEQEVVPIGSTKPIKVDVRIIACANRDLPTEVAEGRFRADLYYRLNVFP
LTLRPLRERADDIAPLAFAMALRHAPDPAKVPCPSEAAIAMLKLHSWPGNVRELENVMRR
ALLLAHGNDVITPEHIVFDSPARLIESPVTATGFGVTVAQPQVEEAETPRKLSSIVQISE
ARAIVETLEACGGSRVRAARELGISERTLRYRLASMRDAGIEIGRAAAGGRR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggctattgccacttcactcctcgatcttggtgcaatcgatttgcgtgacgctgcggac
gaggctcctggccgtccgcgcacgcggtcggttcaactttcacgcggcactgcgcccgca
ttcggtcgcaagggcgcatcgcagatcgcgttgacttatgtcgatccggtcagtgaagct
tcgcttgccatgctgctcgcagccatggccggcgccgacgagccgatcgcggcggacccg
gaaagcctttcggtcttcgctctcgccgaccgtctggccaacagcgacattccggtgctg
atcaacggcccgaccgggaccggcaaggaagtcctgagccgcttcatccacgcccgcagc
ccgcgccgcgaaggtccgttcatcgccgtcaactgcgcggcgatgcccgagacgatgctc
gaggcgatgctcttcggccaccagaagggcgcattcaccggcgctacccaggcgagcgaa
ggcttcatccgcgcggcggacggcggcaccctgctgctggacgaaatcgccgagatgccg
cttcagctccaggccaagctgctgcgcgcgctgcaggaacaggaagtcgttccgatcggc
tcgaccaagccgatcaaggtcgacgtgcgcatcatcgcctgcgccaaccgcgacctgccg
accgaagtggccgaaggccgcttccgcgccgacctttattaccgcctcaacgtgttcccg
ctgacgctgcgcccgctgcgcgagcgcgccgacgacatcgccccgctcgccttcgcgatg
gcgctgcgtcacgcgccggacccggccaaggtgccgtgccccagcgaagcggcgatcgcg
atgctcaagctgcactcctggcccggcaacgtgcgcgagctggagaacgtcatgcgccgc
gcgctgctccttgcccacggcaacgacgtgatcacgcccgagcacatcgtgttcgacagc
ccggcccgcctgatcgaatcgcccgtcacggccaccggcttcggcgtcaccgtagcccag
ccgcaggtcgaagaggcggaaacgccgcgcaagctttcctcgatcgtgcagatctcggaa
gcccgcgccatcgtcgagacgctcgaggcatgcggcggcagccgggtgcgtgcggcccgc
gaactcggcatctccgaacggaccctgcgctatcgcctcgcttcgatgcgtgatgccggg
atcgagatcggcagagcggccgcaggaggccgtcgatga
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